Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1684 |
Symbol | |
ID | 6207811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2069210 |
End bp | 2070001 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641691331 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001818568 |
Protein GI | 182413502 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTTC CCCACCAGAT CGTTTGGATC ACCGGCGCCT CCTCGGGCAT CGGCGAGGCG CTTGCGTACG CATTCGCCCG CGCGGGCGCC ACGCTGGTGC TGTCGAGCCG GCGCGCCGAC GAACTCGAGC GCGTCCGGCG CGCCTGCGAC CGGCCTGACG CTCATGCCTG CGTCGTGCTT GATCTCAGCC GCAGTCAAAC TTTCGCGGGA GCGGTGGCGG AGATGCTCGC GCGTTTCGGC CGGATCGACG TGCTGATCAA CAATGCCGGC GTGAGCCAAC GGGCGCGAGC ACTCGACACG AGCAGCACGG TCGAACGCGC CATCATGGAG ACCGACTACT TCGGTCCGGT GGCGCTCACC AAGGCCGTGT TGCCGACGAT GCTCGAGCAT CACACCGGGC GCGTCGTGGT CGTAAGCAGT GTCATGGGCT ATGTCGGCAC GCCAGGCCGT TCCAGCTACG CCGCGGCCAA GCACGCGTTG CATGGCTACT TCGATTCGCT GCGCGCGGAG CTGGCGAACA CCGGCGTCGG CGTGACGCTC GCGTGCCCCG GTTACGTGCG CACCGCCGTC TCGGCGAATG CCCTCGGCCC GCGCGGTGAG AAACACGGCC GAATGGATGC CACGCAGCAA CGCGGCATCA GCCCGGAGCG CTGCGCAGCG GCGATCGTGC GTGCTGTCGC CCGCGGTCGC GAAGAGATCG CCGTCGGCGG CTGGGAGGTC GCCGGCATCT ACCTCAAGCG TTTTGTGCCA TGGCTGTTCT CGCGGATCGC GCGGCGCATG AAGACGCCAT GA
|
Protein sequence | MNFPHQIVWI TGASSGIGEA LAYAFARAGA TLVLSSRRAD ELERVRRACD RPDAHACVVL DLSRSQTFAG AVAEMLARFG RIDVLINNAG VSQRARALDT SSTVERAIME TDYFGPVALT KAVLPTMLEH HTGRVVVVSS VMGYVGTPGR SSYAAAKHAL HGYFDSLRAE LANTGVGVTL ACPGYVRTAV SANALGPRGE KHGRMDATQQ RGISPERCAA AIVRAVARGR EEIAVGGWEV AGIYLKRFVP WLFSRIARRM KTP
|
| |