Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1652 |
Symbol | |
ID | 6206740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2026842 |
End bp | 2027357 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691294 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001818536 |
Protein GI | 182413470 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGATG TCGATGACCA CACGTCTTGG GCAGAATGGT TTCAGCTTCA CGGCTCCAGG CTGCTGCTGT GCGCCCGGCA ATGGACGCCC TCGCTGGCGG ACGCCGAGGA CGTGGTTCAG GAAGGATTCG TTCGCTACTG GAAACATCAG CGGCATTTGG GCGGAGATCC CTTTGCGCTG GTGCTTACGT CGGTGCGGCG CGCGGCATTG GATCGTGCGC GGAGCGACGC ACGGCGGGCG CAACGCGAGG ATCACTATGG CCAGGAAGGA AGTGGGGACG CGCCGTTCTT CGCCGTTGGC GCTGAGGCCG ATGAACGCAC CCGCGCGGTG GAAGCGGCGC TGCGACAGCT GCCGGCCGAG CAGCGCGAGG TCCTCGTACT CAAGCTCTGG GGCGAACTCA CCTTCGCCGA GATCGCTCGG GAGTTGGACC TTTCGCCCAA CACCGCGGCC TCGCGCTACC GCTATGCGCT CGGAGCGCTC AAGGAGCACT TGACCGCTGC TGATTGCCAT GGATGA
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Protein sequence | MEDVDDHTSW AEWFQLHGSR LLLCARQWTP SLADAEDVVQ EGFVRYWKHQ RHLGGDPFAL VLTSVRRAAL DRARSDARRA QREDHYGQEG SGDAPFFAVG AEADERTRAV EAALRQLPAE QREVLVLKLW GELTFAEIAR ELDLSPNTAA SRYRYALGAL KEHLTAADCH G
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