Gene Oter_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1626 
Symbol 
ID6205079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1998604 
End bp2000463 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content64% 
IMG OID641691268 
ProductABC transporter related 
Protein accessionYP_001818510 
Protein GI182413444 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA TCGCTGACAT TTCCAAGTCC TATGGCACCC GCGAGCTGTT CGCGGAGGTG 
TCGCTGTTCA TCGCCCGCAC CGATCGTTAC GGCTTGGTGG GGCCCAACGG CGCCGGCAAA
ACCACGCTGT TCAACCTGAT CCTCGGCGAG GAATCGCCCG ACTCCGGCAC GATCGAATGG
GAGCGCGGTG CAGACTTCGG CTTTCTGCCG CAAGAGAGCG CGCCCGTGGC CGACGAGACC
ATCCTGGAGA TCGCCACCAG CGGCAAGAAA CTGGTCCCGG AAAACGACGA CGACTACGAC
ATCGACTACA CCCTCGAGCC GCGGGCCAAG AAAATTCTCG CCGGCCTCGG TTTTCGCGAG
GGCGACGCCG GCAAGCTCGC CAAGACCTTC TCCGGCGGCT GGGTGATGCG CGCCCACCTG
GCCCGGCTCC TCGTCGCGGA GCCCGCGCTG CTCCTCCTCG ACGAGCCCAC CAACCATCTC
GATCTGGAGG CGCTGCTCTG GTTTCAGGAC TACCTCAGCC GTTATCCGGG CGGGCTGGTC
GTCATCTCGC ACGATCGCGC GTTTCTCAAT GCGCTGTGCA CCGGCATCCT CGAACTCCGC
AGCGGCCGGC TGAATCGCTA CACGGGCAAC TATGACGACT ACTTGAACGA GCGCGACGCC
CGCAAGGCGC AGCAACTCGC CGCCTTCAAG AACCAGCAGC GCGAGATCGC TCACCTCCAA
CGCTTCGTCG ATCGGTTCGG CGCCAAGGCC TCCATGGCTT CCCGCGCGAA ATCCAAAGAG
AAGCAAATCG AACGCCTCGA GGCCGTCGCC GTCGACGAGC CGGAGGACGA TCTCAAACGG
ATCCACTTCA AGTTCCCGCA GCCTCCGCGT TCCGGGCTGC GCGTAGCCAC CTTGGAACAC
GTCCAGCAAG CTTACGGCGA TCATGTCGTG TATCGGGACC TCAATTTCGA GGCCGAGCGC
GGCCAACGGA TCGTGCTGGT CGGTCCCAAC GGCGCCGGCA AGTCCACCCT ACTCAAGATT
CTGGGCGGCG TGATTCCGAT CCAGGGCGGG AGCTTCGAAC TGGGCAGCAA CGTGATAACC
GGCTACTTCG CGCAAAACCG GCTCGATAAC CTCCGCGCCG ACGCGACGGT CTTCGACAAC
GTGATGGAGT TGCGCACCAA CGAGAATCAG CTCACCGAAC AACAAGCCCG CGCGATCCTC
GGCGCTTTTC TTTTCCGCAA GGACGACGTG TTCAAGAAGG TTTCCGTGCT GTCCGGCGGC
GAGAAATCGC GGCTGGCCCT GGCCCGACTG CTGGTCAAAC CGCCCAATCT GCTCCTGATG
GACGAGCCGA CCACGCACCT CGACATGGCG TCAATCGACG CGCTGGTCAG CGCGCTGCAG
AATTACGAGG GCACGCTGAT CTTCATCAGC CACGACGTGT ATTTTATTCG CGCGCTCGCC
CGCAACGTCC TGCACGTCCA TTCGGGCCGG CTCACGCCGT ATGCGGGCGA CTACGACTAC
TACCTGGAGA AATCTCGCGC GACCAACGAG CGCGCGGCGC TCACGGCCGG CTTCACCGAT
GCGCGGCCCG TGCAGGTGAA AGCGGCTGCC GCGCCCGAGC CCGCCCCCCG CAAGAAAACC
AGCCCAAACG AGCTGAAGAA GCTGCGCATC GAAGTGGGCA AGCTGGAGCA ACGCGTAGCC
GAGCTGGAGA CCAAGCAGTC CGAGCTCACG GCCGAACTGG AGGCCCCCGA AACCTACGCG
AACAAGGGGC GTTTTCACCA CCTCAACCGC GAACTCACCG TCATCGTCGA TCAGATCGCC
GCCGCCACCG CCGAGTGGGA GACCGCCGCG ACCAAGCTGG CCGAGCTGGA AAAACCGTAG
 
Protein sequence
MLTIADISKS YGTRELFAEV SLFIARTDRY GLVGPNGAGK TTLFNLILGE ESPDSGTIEW 
ERGADFGFLP QESAPVADET ILEIATSGKK LVPENDDDYD IDYTLEPRAK KILAGLGFRE
GDAGKLAKTF SGGWVMRAHL ARLLVAEPAL LLLDEPTNHL DLEALLWFQD YLSRYPGGLV
VISHDRAFLN ALCTGILELR SGRLNRYTGN YDDYLNERDA RKAQQLAAFK NQQREIAHLQ
RFVDRFGAKA SMASRAKSKE KQIERLEAVA VDEPEDDLKR IHFKFPQPPR SGLRVATLEH
VQQAYGDHVV YRDLNFEAER GQRIVLVGPN GAGKSTLLKI LGGVIPIQGG SFELGSNVIT
GYFAQNRLDN LRADATVFDN VMELRTNENQ LTEQQARAIL GAFLFRKDDV FKKVSVLSGG
EKSRLALARL LVKPPNLLLM DEPTTHLDMA SIDALVSALQ NYEGTLIFIS HDVYFIRALA
RNVLHVHSGR LTPYAGDYDY YLEKSRATNE RAALTAGFTD ARPVQVKAAA APEPAPRKKT
SPNELKKLRI EVGKLEQRVA ELETKQSELT AELEAPETYA NKGRFHHLNR ELTVIVDQIA
AATAEWETAA TKLAELEKP