Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1626 |
Symbol | |
ID | 6205079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1998604 |
End bp | 2000463 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641691268 |
Product | ABC transporter related |
Protein accession | YP_001818510 |
Protein GI | 182413444 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGA TCGCTGACAT TTCCAAGTCC TATGGCACCC GCGAGCTGTT CGCGGAGGTG TCGCTGTTCA TCGCCCGCAC CGATCGTTAC GGCTTGGTGG GGCCCAACGG CGCCGGCAAA ACCACGCTGT TCAACCTGAT CCTCGGCGAG GAATCGCCCG ACTCCGGCAC GATCGAATGG GAGCGCGGTG CAGACTTCGG CTTTCTGCCG CAAGAGAGCG CGCCCGTGGC CGACGAGACC ATCCTGGAGA TCGCCACCAG CGGCAAGAAA CTGGTCCCGG AAAACGACGA CGACTACGAC ATCGACTACA CCCTCGAGCC GCGGGCCAAG AAAATTCTCG CCGGCCTCGG TTTTCGCGAG GGCGACGCCG GCAAGCTCGC CAAGACCTTC TCCGGCGGCT GGGTGATGCG CGCCCACCTG GCCCGGCTCC TCGTCGCGGA GCCCGCGCTG CTCCTCCTCG ACGAGCCCAC CAACCATCTC GATCTGGAGG CGCTGCTCTG GTTTCAGGAC TACCTCAGCC GTTATCCGGG CGGGCTGGTC GTCATCTCGC ACGATCGCGC GTTTCTCAAT GCGCTGTGCA CCGGCATCCT CGAACTCCGC AGCGGCCGGC TGAATCGCTA CACGGGCAAC TATGACGACT ACTTGAACGA GCGCGACGCC CGCAAGGCGC AGCAACTCGC CGCCTTCAAG AACCAGCAGC GCGAGATCGC TCACCTCCAA CGCTTCGTCG ATCGGTTCGG CGCCAAGGCC TCCATGGCTT CCCGCGCGAA ATCCAAAGAG AAGCAAATCG AACGCCTCGA GGCCGTCGCC GTCGACGAGC CGGAGGACGA TCTCAAACGG ATCCACTTCA AGTTCCCGCA GCCTCCGCGT TCCGGGCTGC GCGTAGCCAC CTTGGAACAC GTCCAGCAAG CTTACGGCGA TCATGTCGTG TATCGGGACC TCAATTTCGA GGCCGAGCGC GGCCAACGGA TCGTGCTGGT CGGTCCCAAC GGCGCCGGCA AGTCCACCCT ACTCAAGATT CTGGGCGGCG TGATTCCGAT CCAGGGCGGG AGCTTCGAAC TGGGCAGCAA CGTGATAACC GGCTACTTCG CGCAAAACCG GCTCGATAAC CTCCGCGCCG ACGCGACGGT CTTCGACAAC GTGATGGAGT TGCGCACCAA CGAGAATCAG CTCACCGAAC AACAAGCCCG CGCGATCCTC GGCGCTTTTC TTTTCCGCAA GGACGACGTG TTCAAGAAGG TTTCCGTGCT GTCCGGCGGC GAGAAATCGC GGCTGGCCCT GGCCCGACTG CTGGTCAAAC CGCCCAATCT GCTCCTGATG GACGAGCCGA CCACGCACCT CGACATGGCG TCAATCGACG CGCTGGTCAG CGCGCTGCAG AATTACGAGG GCACGCTGAT CTTCATCAGC CACGACGTGT ATTTTATTCG CGCGCTCGCC CGCAACGTCC TGCACGTCCA TTCGGGCCGG CTCACGCCGT ATGCGGGCGA CTACGACTAC TACCTGGAGA AATCTCGCGC GACCAACGAG CGCGCGGCGC TCACGGCCGG CTTCACCGAT GCGCGGCCCG TGCAGGTGAA AGCGGCTGCC GCGCCCGAGC CCGCCCCCCG CAAGAAAACC AGCCCAAACG AGCTGAAGAA GCTGCGCATC GAAGTGGGCA AGCTGGAGCA ACGCGTAGCC GAGCTGGAGA CCAAGCAGTC CGAGCTCACG GCCGAACTGG AGGCCCCCGA AACCTACGCG AACAAGGGGC GTTTTCACCA CCTCAACCGC GAACTCACCG TCATCGTCGA TCAGATCGCC GCCGCCACCG CCGAGTGGGA GACCGCCGCG ACCAAGCTGG CCGAGCTGGA AAAACCGTAG
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Protein sequence | MLTIADISKS YGTRELFAEV SLFIARTDRY GLVGPNGAGK TTLFNLILGE ESPDSGTIEW ERGADFGFLP QESAPVADET ILEIATSGKK LVPENDDDYD IDYTLEPRAK KILAGLGFRE GDAGKLAKTF SGGWVMRAHL ARLLVAEPAL LLLDEPTNHL DLEALLWFQD YLSRYPGGLV VISHDRAFLN ALCTGILELR SGRLNRYTGN YDDYLNERDA RKAQQLAAFK NQQREIAHLQ RFVDRFGAKA SMASRAKSKE KQIERLEAVA VDEPEDDLKR IHFKFPQPPR SGLRVATLEH VQQAYGDHVV YRDLNFEAER GQRIVLVGPN GAGKSTLLKI LGGVIPIQGG SFELGSNVIT GYFAQNRLDN LRADATVFDN VMELRTNENQ LTEQQARAIL GAFLFRKDDV FKKVSVLSGG EKSRLALARL LVKPPNLLLM DEPTTHLDMA SIDALVSALQ NYEGTLIFIS HDVYFIRALA RNVLHVHSGR LTPYAGDYDY YLEKSRATNE RAALTAGFTD ARPVQVKAAA APEPAPRKKT SPNELKKLRI EVGKLEQRVA ELETKQSELT AELEAPETYA NKGRFHHLNR ELTVIVDQIA AATAEWETAA TKLAELEKP
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