Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1610 |
Symbol | |
ID | 6208171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1979942 |
End bp | 1981105 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691252 |
Product | hypothetical protein |
Protein accession | YP_001818494 |
Protein GI | 182413428 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.295334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTTC GTCCGTCTTC CTTCCCCCCG CTCCGCGCCG TGTGGCTGCT GCTGTTGTGG CTCGTCGTGC CGCAACGGTC CGCGAAGGCG GAGACGGGTG TGAGCTACAA GTTCGCGGAC TACCGCGAAT CTGGCGACCG CATCGCGGTG CGGTCGCACT ACGGCCTCGT CGAGCAGACG ATCGGCACCG ACATGCGGCT GCGGGTCAAC GGCGTGATCG ACGCGATCGC GGGCGCCACC CCGACCGGCC AGCCGCCGGA AACGCCGGGC GGCCCCGTGC CGCTGACGAC GATTCACGAC CGACGCAAGG CGTGGGGCGC CGAGTTTTTC CGGCAGTTTC CGCGCATCGG CGTCACCCTC GGTGCCGCGA ACAGCCGCGA GAGCGATTAC GTTTCCACGG GCTGGTCGTT GAACACGCTG ACCGATTTCA ACCAGAAGAA CACCACGCTG CTGCTCGGCG TCGCCGGCAC GGACGACGAC ATCAAGGTGT TTTACCAGAC GGAACGCGCG AAGAAACGCA CCACGGATCT GATCGCCGGC GTCACCCAGC TGCTCGATGC GCGCACCTCC GTGGTGTTCA ATCTCGGTTA CGGCCACAGC GAAGGCTTTC ACGCCGATCC GTACCGGCTC ATCCAGAAAC GCGTGGAAAT TTTTCCCGGT GTCGTGCTGC CGCGGACGTT CGGGGAAAAC CGACCCGACG AGCGCGACAA ATGGACCGCT TATGCCGCGG TGAATCGCGC CTATCCCGCG CTGCACGGCG CGGTCGAGGC GAACTACCGG TGGTTCCATG ACAGCTTCGG GACCAACGCT CACACCGTCG AACTCGCGTG GTTCCAGCAG CTCGGCGCGC GGCTGACGCT GCGCCCGGGA ATCCGCTACT ACCAGCAGAG CGCGGCGGAT TTTTATCGGA TCGATCTCGA GGGCACGAAC ATCCTGCCGG GCGAGCGACC GAATCCCGCC GGGCCGTTCT TTTCCGCCGA CTACCGGCTC TCCGCGCTGC GCAGCACCAC CTATGGATTG AAGGCGATCG CGACGCTGAC GGAGCACTGG CAGCTCGATG CCTCGATTGA ACGCTACGAG ATGCGCGGCC GGGACGGCCT CACCTCCCCG AGCGCATATC CCCGCGCCGT GTTGGTGAAC GTCGGGGTGC GTCTCACATG GTGA
|
Protein sequence | MRLRPSSFPP LRAVWLLLLW LVVPQRSAKA ETGVSYKFAD YRESGDRIAV RSHYGLVEQT IGTDMRLRVN GVIDAIAGAT PTGQPPETPG GPVPLTTIHD RRKAWGAEFF RQFPRIGVTL GAANSRESDY VSTGWSLNTL TDFNQKNTTL LLGVAGTDDD IKVFYQTERA KKRTTDLIAG VTQLLDARTS VVFNLGYGHS EGFHADPYRL IQKRVEIFPG VVLPRTFGEN RPDERDKWTA YAAVNRAYPA LHGAVEANYR WFHDSFGTNA HTVELAWFQQ LGARLTLRPG IRYYQQSAAD FYRIDLEGTN ILPGERPNPA GPFFSADYRL SALRSTTYGL KAIATLTEHW QLDASIERYE MRGRDGLTSP SAYPRAVLVN VGVRLTW
|
| |