Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1582 |
Symbol | |
ID | 6206253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1956144 |
End bp | 1957595 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641691223 |
Product | transcriptional regulator |
Protein accession | YP_001818466 |
Protein GI | 182413400 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.121263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCAGA CCATCGCCGC CAAGCCCGAA CGTGCGCCGC TCTACCTCGA GCTCGCCCGC GAAATCCAGG AGCTCGTCGA ACAGGGCACG CTCCGTCCCG GCCACCGGTT GCCGTCCGTC CGCCGGATGG CCCTCCAGCG CGACGTGAGC ATTTCCACGG TCATTCAGGC TTACACGGTG TTGGAAAACC GCAGCGTGCT CGAGGCGCGG CCGCAGTCGG GTTTCTATAT CCGGCCGCAG CTCGTCGGCC AGGCCCTCGA GCCGCGGATG GCCAAGCCCA TGGCGAAGCC GAGCTACGTC GGCGAAAACG ACCTCACCGC CGAGATGCTG GCGCTGTGCG CCGATCCTGA CTTCGTGCAG TTCGGCGCGG CGTGCCCGCA CCACACGCTC TTCCCGACGC GCAAGCTGGC GCGGCTCGTC GGCTCGGTCT GCCGCAACGA TCCCGCGATG CTCGGCCGCT ACGCGATGAA CTGGGCCTAC GATCCGCTCA CCCGCGAGAT CGCCCGCCGC TACCTGCAGT GCGGCGCGCC GCTGTCGCAC GACGAGCTTG TCATTACCAT CGGCTGCGCC GAGGCGATCA ATCTGTCGCT GCGCGCCGTC ACCAAGCCCG GCGACACCGT CGCGGTCGAA ACCCCCGCCT ACTTCGGCTT CCTCGAAACG ATCCAAAGCC TCAACCTGCG CGTACTCGAG ATTCCCACCG AATCGCGCAC CGGTCTCTGC CTCGACGCGT TCCAGGACGC GCTCGCGCAC AACGACGTGA AGGCGCTCAT CGTGATGCCG AGTTTCCAGA ATCCGCTCGG CTCCTGCATG CCGGACGAGA AGAAGGCGAA GCTCTACGAG CTCCTGCAGC AGCACGACGT GCCCGCGATC GAGGACGACA TCTACGGCGA CCTGCACTTC GGCGAACGCC GGCCCAAGCC ACTCAAGGCG TGGGACACCG ACGGCCGGGT GCTGTTGTGC AGTTCGTTCG GCAAGACGCT CGCGCCGTCG CTCCGCGTCG GCTGGTGCGC GCCGGGCCGT TATCTCGAAC GGCTCCGGCG GCTCAAGTTT ACGAATACCC TCGGCACGCC GGTGATTCTC CAGAAGACCG TCTCCGACTT CCTGCGCAAC GGCGGCTACG ACCACCACCT GCGCTCGATC CGCCGCGCCT ACCACAACCA GCTCCACGTC GTCTCGCAGG CGGTGCTCCG CTATTTCCCC GAGGGCACGC GGCTCAGCCG GCCGCAGGGC GGGTTCATCC TCTGGATCGA AATGCCGCCG CGCGTCGACG CGGTCAAGCT GCAGCGCGAC GCCGCGAAGC AGCGGATCTG CGCCGCGCCC GGGCCGCTGT TCTCCGTCAA GGACCGCTAC CGCAATTGCC TGCGGATGAA CTGCGGCCTG CCGTGGAACG ACGTGATCGA GCAGTCGCTG CGCACGCTCG GCGAACTGGC GAAGAACCAG CTCGCCGCCT GA
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Protein sequence | MIQTIAAKPE RAPLYLELAR EIQELVEQGT LRPGHRLPSV RRMALQRDVS ISTVIQAYTV LENRSVLEAR PQSGFYIRPQ LVGQALEPRM AKPMAKPSYV GENDLTAEML ALCADPDFVQ FGAACPHHTL FPTRKLARLV GSVCRNDPAM LGRYAMNWAY DPLTREIARR YLQCGAPLSH DELVITIGCA EAINLSLRAV TKPGDTVAVE TPAYFGFLET IQSLNLRVLE IPTESRTGLC LDAFQDALAH NDVKALIVMP SFQNPLGSCM PDEKKAKLYE LLQQHDVPAI EDDIYGDLHF GERRPKPLKA WDTDGRVLLC SSFGKTLAPS LRVGWCAPGR YLERLRRLKF TNTLGTPVIL QKTVSDFLRN GGYDHHLRSI RRAYHNQLHV VSQAVLRYFP EGTRLSRPQG GFILWIEMPP RVDAVKLQRD AAKQRICAAP GPLFSVKDRY RNCLRMNCGL PWNDVIEQSL RTLGELAKNQ LAA
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