Gene Oter_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1442 
Symbol 
ID6205349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1802725 
End bp1804368 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content66% 
IMG OID641691084 
Product2',3'-cyclic-nucleotide 2'-phosphodiesterase 
Protein accessionYP_001818327 
Protein GI182413261 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCGC TTCCTGCTTC AATCCGACTC GTCGCGCGGC CGCTGGTGCT GGGCCTGCTG 
TTTTTCACCG CGCTGCAGGC CACCGAGCGC GCGCAAGTGA CGCTGCTCGC GACCACCGAT
CTGCACGGCC GGATCCTGCC CTATGACTAC TACGCGGACA AACCCGCCGA GGTCGGACTC
GCGAAGCTCG CGACGCTGAT CAAGCAGGCG CGGCAGGAGC GGCCCGATCT GCTGCTGCTC
GATTGTGGCG ACACCATCCA GGGCACGCCG CTCGCCTATT TCCACAACCG GAAGAACAAC
GCGCCACGCG ACCCAATGAT GCTCGTGATG AGCACGCTCG GCTACGCGAG CCTGACGCCG
GGCAACCACG AGTATAACTT CGGCCGCGCG GTGCTCGAGA AGGCGCGCCG CGAGGCGACG
TTCCCGTGGA TCTCGGCCAA CACGTATCGC GCGGGCATCG ACGAAACGGC CTACGAGCCT
TATGTGGTGA AACAGATCGG CGCGGTGCGC GTCGGCATCC TTGGACTCAC GACGCCGGCG
ATCCCGAACT GGGAGAATCC CGAGAATTAT GCGGGGCTGG AGTTCCGGCC GCTGGTGAGC
GAGGCGAAGA AATGGGTGGA AGTGTTGCGG GGCCGCGAGC ATGTCGACGT GGTGGTCGTC
ACGATGCACG GCGGCGTCGA GGTGGACCTC GCAACGGGCC GGCGGGCTCC TGGGGACTTC
GAGGGCGAAA ACGCCGCGCT CGCGCTGGCG CAGCAAGTGC CGGGCATCGA CGTGATGTTT
CTCGGGCACA CCCACCGCGA CATCTCCGCG CTCGTGGTGA ATGGCGTGCT GCTGGCGCAG
GCCGGCCGCT GGGGCGACCG GCTGGTGCGT GCCGATGTCA CGTTGACCCG CGAAGGCGGC
GCGGCGTGGA GCGTGGAGGC GAAGGCGTCG CGCTCGCTCC CCGTGCGCGC GGAGATTCCG
GCTGATCCGG AGGTGCTGGC GCTGGCCGAG CCCTATCACC GCGAAACGCA GGCGTGGCTG
TCTCGGCCAA TCGGTCGCAC CGCGCGTCCG CTGGAGGCGG CGAACGCTCA CCTGCAGGAT
TCGGCGCTGC TCGATTTGAT CCAGCGCGCG CAGCTCGAGG CGGGCAACGC CGACGTATCG
CTGGCGGCGA ATTTCAATCC GCGGGCGCGA GTGCCGGCGG GCACGGTCAC GGTGCGCGAC
ATCGCGGGGC TCTACGTTTA TGAGAACACG CTCTACGTGC TCGAGATCAC CGGTGCGCAG
CTGAAGGCGG CGCTGGAACA TTCTGCTCGC TATTTTCTAC CCTATCAGGA GGGAAAAACG
CCGGCGGAGC TGATCGACCG CAATATCCCC GGGTACAACT TCGATGTGGC GGAAGGCGTG
AGCTACGAGA TCGACCTGCG CCGGTCGATT GGCGACCGGA TCCAGTATCT GATGTTCAAG
GGCGCGCCGC TCGCACCGGA GCGGACGTTG CGGCTGGCGA CGAACAACTA CCGCTACAAC
GGCGGTGGCG GGTACACGAT GTTCAAGAAC GCGAAGGTGC TCACGCGTTC GAGCGCGGAA
ATCCGCGATC TGATCATCGC CTGGGTGGAG AAACACGGCG AGATCCCGTC CGAACCGAGC
GGCAACTGGC GGATCGTGCC GTGA
 
Protein sequence
MISLPASIRL VARPLVLGLL FFTALQATER AQVTLLATTD LHGRILPYDY YADKPAEVGL 
AKLATLIKQA RQERPDLLLL DCGDTIQGTP LAYFHNRKNN APRDPMMLVM STLGYASLTP
GNHEYNFGRA VLEKARREAT FPWISANTYR AGIDETAYEP YVVKQIGAVR VGILGLTTPA
IPNWENPENY AGLEFRPLVS EAKKWVEVLR GREHVDVVVV TMHGGVEVDL ATGRRAPGDF
EGENAALALA QQVPGIDVMF LGHTHRDISA LVVNGVLLAQ AGRWGDRLVR ADVTLTREGG
AAWSVEAKAS RSLPVRAEIP ADPEVLALAE PYHRETQAWL SRPIGRTARP LEAANAHLQD
SALLDLIQRA QLEAGNADVS LAANFNPRAR VPAGTVTVRD IAGLYVYENT LYVLEITGAQ
LKAALEHSAR YFLPYQEGKT PAELIDRNIP GYNFDVAEGV SYEIDLRRSI GDRIQYLMFK
GAPLAPERTL RLATNNYRYN GGGGYTMFKN AKVLTRSSAE IRDLIIAWVE KHGEIPSEPS
GNWRIVP