Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1442 |
Symbol | |
ID | 6205349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1802725 |
End bp | 1804368 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691084 |
Product | 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
Protein accession | YP_001818327 |
Protein GI | 182413261 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCGC TTCCTGCTTC AATCCGACTC GTCGCGCGGC CGCTGGTGCT GGGCCTGCTG TTTTTCACCG CGCTGCAGGC CACCGAGCGC GCGCAAGTGA CGCTGCTCGC GACCACCGAT CTGCACGGCC GGATCCTGCC CTATGACTAC TACGCGGACA AACCCGCCGA GGTCGGACTC GCGAAGCTCG CGACGCTGAT CAAGCAGGCG CGGCAGGAGC GGCCCGATCT GCTGCTGCTC GATTGTGGCG ACACCATCCA GGGCACGCCG CTCGCCTATT TCCACAACCG GAAGAACAAC GCGCCACGCG ACCCAATGAT GCTCGTGATG AGCACGCTCG GCTACGCGAG CCTGACGCCG GGCAACCACG AGTATAACTT CGGCCGCGCG GTGCTCGAGA AGGCGCGCCG CGAGGCGACG TTCCCGTGGA TCTCGGCCAA CACGTATCGC GCGGGCATCG ACGAAACGGC CTACGAGCCT TATGTGGTGA AACAGATCGG CGCGGTGCGC GTCGGCATCC TTGGACTCAC GACGCCGGCG ATCCCGAACT GGGAGAATCC CGAGAATTAT GCGGGGCTGG AGTTCCGGCC GCTGGTGAGC GAGGCGAAGA AATGGGTGGA AGTGTTGCGG GGCCGCGAGC ATGTCGACGT GGTGGTCGTC ACGATGCACG GCGGCGTCGA GGTGGACCTC GCAACGGGCC GGCGGGCTCC TGGGGACTTC GAGGGCGAAA ACGCCGCGCT CGCGCTGGCG CAGCAAGTGC CGGGCATCGA CGTGATGTTT CTCGGGCACA CCCACCGCGA CATCTCCGCG CTCGTGGTGA ATGGCGTGCT GCTGGCGCAG GCCGGCCGCT GGGGCGACCG GCTGGTGCGT GCCGATGTCA CGTTGACCCG CGAAGGCGGC GCGGCGTGGA GCGTGGAGGC GAAGGCGTCG CGCTCGCTCC CCGTGCGCGC GGAGATTCCG GCTGATCCGG AGGTGCTGGC GCTGGCCGAG CCCTATCACC GCGAAACGCA GGCGTGGCTG TCTCGGCCAA TCGGTCGCAC CGCGCGTCCG CTGGAGGCGG CGAACGCTCA CCTGCAGGAT TCGGCGCTGC TCGATTTGAT CCAGCGCGCG CAGCTCGAGG CGGGCAACGC CGACGTATCG CTGGCGGCGA ATTTCAATCC GCGGGCGCGA GTGCCGGCGG GCACGGTCAC GGTGCGCGAC ATCGCGGGGC TCTACGTTTA TGAGAACACG CTCTACGTGC TCGAGATCAC CGGTGCGCAG CTGAAGGCGG CGCTGGAACA TTCTGCTCGC TATTTTCTAC CCTATCAGGA GGGAAAAACG CCGGCGGAGC TGATCGACCG CAATATCCCC GGGTACAACT TCGATGTGGC GGAAGGCGTG AGCTACGAGA TCGACCTGCG CCGGTCGATT GGCGACCGGA TCCAGTATCT GATGTTCAAG GGCGCGCCGC TCGCACCGGA GCGGACGTTG CGGCTGGCGA CGAACAACTA CCGCTACAAC GGCGGTGGCG GGTACACGAT GTTCAAGAAC GCGAAGGTGC TCACGCGTTC GAGCGCGGAA ATCCGCGATC TGATCATCGC CTGGGTGGAG AAACACGGCG AGATCCCGTC CGAACCGAGC GGCAACTGGC GGATCGTGCC GTGA
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Protein sequence | MISLPASIRL VARPLVLGLL FFTALQATER AQVTLLATTD LHGRILPYDY YADKPAEVGL AKLATLIKQA RQERPDLLLL DCGDTIQGTP LAYFHNRKNN APRDPMMLVM STLGYASLTP GNHEYNFGRA VLEKARREAT FPWISANTYR AGIDETAYEP YVVKQIGAVR VGILGLTTPA IPNWENPENY AGLEFRPLVS EAKKWVEVLR GREHVDVVVV TMHGGVEVDL ATGRRAPGDF EGENAALALA QQVPGIDVMF LGHTHRDISA LVVNGVLLAQ AGRWGDRLVR ADVTLTREGG AAWSVEAKAS RSLPVRAEIP ADPEVLALAE PYHRETQAWL SRPIGRTARP LEAANAHLQD SALLDLIQRA QLEAGNADVS LAANFNPRAR VPAGTVTVRD IAGLYVYENT LYVLEITGAQ LKAALEHSAR YFLPYQEGKT PAELIDRNIP GYNFDVAEGV SYEIDLRRSI GDRIQYLMFK GAPLAPERTL RLATNNYRYN GGGGYTMFKN AKVLTRSSAE IRDLIIAWVE KHGEIPSEPS GNWRIVP
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