| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1343 |
|---|
| Symbol | |
|---|
| ID | 6205384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1656772 |
|---|
| End bp | 1658748 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690984 |
|---|
| Product | YesW |
|---|
| Protein accession | YP_001818228 |
|---|
| Protein GI | 182413162 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCC GCTCTCTCGT GTTTTTGCTC GCCGCGTCCG CGCTCGCCGC CATCGCGCCA
GCCTCCCCCA CTTCGCCCGC GCGCATTATG GAAAAGCTTT CGCGCGGCGT CGTCGCGGTG
CACGAAGCCG ACGGCAGTGT CTTCGTGAGC TGGCGGCTGC TCGCAAGCGA TCCCGCCGGC
GTTGCTTTCA ATGTCTACCG CACGACGGCG CCGCGCGCCG GCGCCGCGAA TGACGTCGGG
CCGTTCGGCT CCCGGCCCGA TCCTGTTGCC GGTACGGTGA AGCTCAACGC GGCGCCGCTC
GCGGACGTCA CGTGGTTTGT CGATCGGCAC GCTGCGCTCG ATCGCGAGAC GACCTACACC
GTGCGTGCCG TCAACGCGGG CGCTGAGGCG GAACCCGACC GCGGCTTCAC GCTGCCCGCC
GGCGCGTCGC CGCTGCCATA TCATTCCGTG CCATTGCAGA CGCCCGCCGG CTACACGCCC
GGCGACGCCT CGCTCGGCGA CCTGGACGGC GATGGCGACT ACGAGATCGT GCTGAAACAG
GAGCAGAATC CGCAGGACAA CTCGCGCTCC GGTGTCACCG GCGAAACGCT GCTGCAGGCC
TACACGCTCG CGGGCCGGCT GCTCTGGACG ATCAATCTCG GGAAAAACAT TCGCGAAGGG
GCGCATTACA CGCAGTTCAT GGTCTACGAC CTCGACAGCG ACGGCCGCGC CGAGGTCGCC
TGCAAGACCG CTGACGGCAC GATCGACGGC ACCGGCAAAA TCATTGGCGA TCCGAACGCC
GACCATCGCA ACGCGCAGGG CCACATCCTC CAGGGCCCGG AGTTTCTCAC GATCTTCGAT
GGTCGCACCG GCGCGGCGCT AGCGACGACG GATTACGTTC CGCCGCGGCA TCCGACCAAG
CTCGAGCCGA CCGGCGATGA GTTGAAGGCG ATCTGGGGCG ACGGCTACGG CAACCGTAGC
GATCGCTATC TCGCCTGTGT CGCGTACCTC GACGGCGAGC GGCCGAGCCT GGTCATGTGC
CGCGGCTATT ACACCCGCGC CGTACTCGCC GCGTGGGACT GGCGCGACGG CAAGCTGACC
CAGCGGTGGG TGTTCGACAG CGACGATGGC ACGCCGGGCA ACGAGCGCTA TCGTGGACAG
GGCAATCACA ACCTCTCCGT CGCCGATGTA GACGAGGACG GCCGCGACGA AATCATCTAC
GGCGCTGCCG TCATCGACGA TAGCGGCCGC GGGCTCTACT CGACCGGCTG GGGCCACGGC
GACGTGATCC ACGTTTCCGA TCTCACGCCC GCAAATCCTG GGCTCGAGAT CTTCGACATC
CAGGAACGCT TTGACGCGCA GGGCATGAGC GTGCGCGATG CGCGCACGGG CCGGCCGATT
TTCACGGTGC CTTCGGTCAA GGCCGCCGAT TCCGGCGGCG ACAAAGGCGA AGGGCCGGGC
CGCGGCAACG CGTTCAACAT CGATCCGCGT TACCCGGGCG CCGAATGCTG GGCCGCGGGC
GCCGGCATGG ACGGCGTGTT CGATGCGGCC GGCAACCGCA TCCTGGAAAA ACGTCCGCGC
GGTTTCCCCT GCAATTTCGG CATTCTGTGG GACGGCGACC TGCTCCACGA ACTGCTCGAT
CAGAATCGAA TCGTGAAATG GAACTGGGAA CGCGAGGAGA TCGAGCCGCT GCTGGTCGCG
CACGCCTGCA CGTCGAACAA CGGTACGAAG GCCACGCCGG CCGTCAGCGC TGATCTGTGG
GGTGATTGGC GCGAAGAAGT CATCTGGCGG ACGCGCGACA ATCGCGAACT GCGGATCTAC
ACTTCGACGA TTCCGACGAA GCACCGGCTG GTCACGTTGA TGCACGATCC GGTTTACCGG
CTCGCGATCG CGTGGCAGAA CGTCGCCTAC AACCAGCCGC CGCATCCGAG TTTTTACCTC
GACGAATCCG CGCCGCTTCC GCCCGCGCCG AAGATCACCT TCCCCGCCGC GCACTGA
|
|---|
| Protein sequence | MNLRSLVFLL AASALAAIAP ASPTSPARIM EKLSRGVVAV HEADGSVFVS WRLLASDPAG
VAFNVYRTTA PRAGAANDVG PFGSRPDPVA GTVKLNAAPL ADVTWFVDRH AALDRETTYT
VRAVNAGAEA EPDRGFTLPA GASPLPYHSV PLQTPAGYTP GDASLGDLDG DGDYEIVLKQ
EQNPQDNSRS GVTGETLLQA YTLAGRLLWT INLGKNIREG AHYTQFMVYD LDSDGRAEVA
CKTADGTIDG TGKIIGDPNA DHRNAQGHIL QGPEFLTIFD GRTGAALATT DYVPPRHPTK
LEPTGDELKA IWGDGYGNRS DRYLACVAYL DGERPSLVMC RGYYTRAVLA AWDWRDGKLT
QRWVFDSDDG TPGNERYRGQ GNHNLSVADV DEDGRDEIIY GAAVIDDSGR GLYSTGWGHG
DVIHVSDLTP ANPGLEIFDI QERFDAQGMS VRDARTGRPI FTVPSVKAAD SGGDKGEGPG
RGNAFNIDPR YPGAECWAAG AGMDGVFDAA GNRILEKRPR GFPCNFGILW DGDLLHELLD
QNRIVKWNWE REEIEPLLVA HACTSNNGTK ATPAVSADLW GDWREEVIWR TRDNRELRIY
TSTIPTKHRL VTLMHDPVYR LAIAWQNVAY NQPPHPSFYL DESAPLPPAP KITFPAAH
|
|---|
| |