| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1342 |
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| Symbol | |
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| ID | 6205602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1654847 |
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| End bp | 1656529 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690983 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001818227 |
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| Protein GI | 182413161 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGA CGGACACGGA ACTTCTGCAT CGCTACAGCG CGCAGCGTTC GGAGGCGGCA
TTCGCCGAGC TGGTGCAGCG ATACATCGAC GTGGTTTATC ATACCGCCCT CCGCCAAAGC
GGCGGGCGCC GAGATGTCGC GGAAGACATC ACGCAAGCCG TGTTCGTATT GGTGGCCCAG
AAGGCCGGCC GACTGCAGGG CCACGAGATG TTGGCCGGCT GGCTGCACAC CGCGACGCGC
TATGTCGCCA AAGATCATCG TCGGGCCGAG GCGCGCCGGT TGATCCGCGA AAGGGAGGCG
AACGCCATGC ACGATGATCC GAGGAGGGCG GAGGTGGAAT GGGATCGGGT GCGGCCAGTG
CTTGACGACG CGCTCAGCGA ATTGAAGCCG GCGGATCGCG AAGCGGTGCT GTTACGGTAC
TTCATGGGAA TATCGCTGGC CGAGGTGGGC GCGCGGCTGA GTGTTTCCGA AAACGCCGCG
CGGATGCGGA TCGACCGCGC GCTCGAGCGG CTGCGGGCGC GACTGGCTCG TCGGGGTGTC
ACCTCGACGA CGACAGCACT TGGTGCCGTG CTCGCGAATT CCGCTGCGGC GGGTGCGCCG
GCGAACCTGG CGTCCAGCAT CACCATCGCG GCGCTCTCCG GGACCGCGAC GGGAACAGGA
GGTGCGGGTC TCGCAGGGCT TTTGATTTCG ATGAACAACA CCAAAGTGAT TGTGGGTCTC
GCGGCTGCGC TGAGCATGGG TGGAGTGGGC ACCTCCCTTT GGCAGGCGGC GACAGTACGG
GAGGTCGAGA GCGCGCTGGC GAACGTCAGT CGCGAGCGAG ATGCCCTGCA AGCGCGCTTG
GGCGCAATAG AGAAGGGGGC ACAAGCGCCA GACCAAATCC GGGCCGGCGG CGTCGCGCCC
TCGCGAGGCA CCGTCGCGAA CGGCGCGACC GAGAGCGGTG TGGGATCCGC TGCAACGCGA
GCCACCAAGG GGGCCACGAC AGCACCTGCG GTTCAGCAGC CGGCGAAGAG CTCCATTCTT
CAGATGCTTA ACCGTAATCC TGCCTTCCGA GACGCGGAGC TGCAGCGCCA ACGCGCGAAC
ATGGGGTTGA AGTATGGTCC ATTCTATCGT TCCTTGCGGC TCTCTTCCGG GCAGATCGCT
GAGTTCGAGG ACGCGATGTG CGAGTGGCTG CAAACCAATA TGGAAACGAC GGCGCTTGCC
GCCGAGCAGG GGCTGCGCGA AACGGACCCA AAGCTGGCCG GTTTGGTGAA GCCGGCGATG
GACAGCCTGA CGGCCCGGCT CAGGTCGGCG ATCGGCGAAG AGGGACTGAT GCAACTAGGC
CCGTATGAAC AGAGCAGCGA TGCCCATGAG ACGATCAGCC TGCTGGCCGG CAACCTTTAC
TACACCGATG TGCCACTGAG CGCCGCTCAA GCGGAGCAGC TCATCCGAAT CGTCGCGGCG
AATACCGGGC AGATGAAGGT GACCGGGATA GTTGGGAAAC CCCGCGAGCT GAATTGGGAG
ACGATCCTCA CCCAAGCGCA GGGGGTGCTT GCACCGGTGC AGCTTGCGAC TCTCCAGCGG
CTCGCGGACC GAAGCCGCTA CCAGCGAATG GTCGAGGCGC TGGCCAGCGG CGCGGAAGTG
GAAGCAAGCG GCGTACCGAC TGCGGACTCC TCGTCAGGAG TCACAACCGC GGGCGGTGGC
TGA
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| Protein sequence | MTPTDTELLH RYSAQRSEAA FAELVQRYID VVYHTALRQS GGRRDVAEDI TQAVFVLVAQ
KAGRLQGHEM LAGWLHTATR YVAKDHRRAE ARRLIREREA NAMHDDPRRA EVEWDRVRPV
LDDALSELKP ADREAVLLRY FMGISLAEVG ARLSVSENAA RMRIDRALER LRARLARRGV
TSTTTALGAV LANSAAAGAP ANLASSITIA ALSGTATGTG GAGLAGLLIS MNNTKVIVGL
AAALSMGGVG TSLWQAATVR EVESALANVS RERDALQARL GAIEKGAQAP DQIRAGGVAP
SRGTVANGAT ESGVGSAATR ATKGATTAPA VQQPAKSSIL QMLNRNPAFR DAELQRQRAN
MGLKYGPFYR SLRLSSGQIA EFEDAMCEWL QTNMETTALA AEQGLRETDP KLAGLVKPAM
DSLTARLRSA IGEEGLMQLG PYEQSSDAHE TISLLAGNLY YTDVPLSAAQ AEQLIRIVAA
NTGQMKVTGI VGKPRELNWE TILTQAQGVL APVQLATLQR LADRSRYQRM VEALASGAEV
EASGVPTADS SSGVTTAGGG
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