| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1273 |
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| Symbol | |
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| ID | 6207058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1577718 |
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| End bp | 1578491 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690914 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001818158 |
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| Protein GI | 182413092 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.355177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCT CTTCGTCTCT TTTCGACCTC ACTGGCCGCA CCGCGTTGAT CACCGGCTCC
AGTCAGGGAC TCGGCCTCGC GCTCGCACGC GGACTCGCCC AGCACGGCGC CGCGATTGTG
CTGAATGGCC GCGATCCCGC GAAAGTCGAA GCCGCCGCCG CAGACCTGCG CGCCGGCGGC
GCCCGCGTGA CGAGCGCGGT CTTCGACGTG ACGGACGCCC GCGCCGTGAC CCACGCGATT
GCGCACGTGC AGGAGACGTT CGGGCCAATC GACATCCTGG TGAACAACGC GGGCATTCAC
CGTCGCGCGC CACTGCTCGA GATGCTCGAG AGCCAGTGGC GTGAGGTGCT CGACACGAAT
CTTACCAGCG CCTTCCTGGT CGCGCGGGCC GTCGCACCCG GGATGATCGC GCGGCGAGCC
GGCAAGATCA TCAACGTCTG TTCGCTGATG AGCGAAATCG GCCGCGCGAC CACCGGCAAC
TACGCCGCGG CCAAGGGCGG GCTGAAGATG CTGACGCGCG CGATGGCGGT GGAGTGGGCC
GAGCACGGGC TTCAGATCAA TGGAATTGGG CCGGGGTACT TTGCCACCGA GATGACGCAG
GCTCTCGTGG AAAACCCGCA GTTCGACGCC TGGTTGAAGC TGCGCACGCC GGCACGTCGG
TGGGGCAAGC CGGAGGAACT CGTGGGCGCG GCGGTGTTCC TCGCCTCGCG GGCGTCGGAT
TTCGTGAACG GCCAGATCCT CTACGTCGAC GGCGGCGTGC TGGCGTCGCT GTAG
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| Protein sequence | MTASSSLFDL TGRTALITGS SQGLGLALAR GLAQHGAAIV LNGRDPAKVE AAAADLRAGG
ARVTSAVFDV TDARAVTHAI AHVQETFGPI DILVNNAGIH RRAPLLEMLE SQWREVLDTN
LTSAFLVARA VAPGMIARRA GKIINVCSLM SEIGRATTGN YAAAKGGLKM LTRAMAVEWA
EHGLQINGIG PGYFATEMTQ ALVENPQFDA WLKLRTPARR WGKPEELVGA AVFLASRASD
FVNGQILYVD GGVLASL
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