| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1239 |
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| Symbol | |
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| ID | 6205566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1533395 |
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| End bp | 1533985 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690880 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001818124 |
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| Protein GI | 182413058 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0482404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.916816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC TGAAGAGGAT CACCGTCTTG CTGGCCGAGG ACCACGCCGT CGTGCGGCAG
GGGCTGTGCA CCTTGCTGGA GACCGAAGGA AGCTTCGAGG TGATCGGCCA GGCGGAGACG
GGGCGCGAGG CGGTGGAACT GACCGCCACG TTGCGGCCGG AGGTGGTCGT CATGGACATT
GCCATGCCGG TGCTCAACGG GCTGGAGGCG ACGCGGCAGA TCCTGAACGC CAACGCCGCG
GCGCGCGTGC TCATTTTGTC GGCGCACAGC GACGACGAAT ACATCGAACG CATGATCGCC
GTCGGAGCCG CCGGTTTTTT GGAGAAGCAG ACGTCAGCGG AGATTCTCAC CAAGGCGATT
CACGAAGTGG CCAGGGGGAA GGCGTTTTAC AGCCCGGCGA TCGCCAAGCG GATGGTCGAC
GGACAAAAAC GGGCGCAGGG GCGCGATGGG CTCGCTAGGA CCAGTGGCAC GCGACTGACC
TCACGCGAGA CCGAGGTGCT CCAATTGGTG GCGGAGGGGC AGGCAAACAA GCAAATTGCC
AGCGTGCTGG GTATCAGCAT CAAGACGGTC GAAAAGCACC GCCACAGGTG A
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| Protein sequence | MNALKRITVL LAEDHAVVRQ GLCTLLETEG SFEVIGQAET GREAVELTAT LRPEVVVMDI
AMPVLNGLEA TRQILNANAA ARVLILSAHS DDEYIERMIA VGAAGFLEKQ TSAEILTKAI
HEVARGKAFY SPAIAKRMVD GQKRAQGRDG LARTSGTRLT SRETEVLQLV AEGQANKQIA
SVLGISIKTV EKHRHR
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