| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1223 |
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| Symbol | |
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| ID | 6206412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1516762 |
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| End bp | 1518318 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690864 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001818108 |
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| Protein GI | 182413042 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.743924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.559819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCCC AGAACCGTCC ACCCGCCGGT ACCGACTCCG AACACGAGGA GTTCTCGCTC
CCGCTCTTCG TCCTCACGGT GCTGGCAACG CTCGCCGGCT TGCTCGCGGG CCTGCGGCTT
TTTGCACCCC AGGTGTGGGC GCAGCAGTTT CTGGCGCCGG TCTCCCACGG GATCGTGGCT
TTCCTGGTGA TCAGCCTGAT CAACTGTTTC ATGGAGTATT TCTTCCATCG TTACGTGCTG
CACCTGCCGG CGGTTCCCTT CCTCCGCCGG CTCTACAAGC AGCACACGCT GCATCACGCG
CTAACCCGCA TCGCGCGCCG CAAAGGCCGC GATGGGCGGG GGATACTTTT CATCGAAAAC
AAGTTCCCGA TCGTCGAACC GGAGCAGGGC GAGGCGTCGT TTTTCCCATG GTATTCGCTT
GCCGTGTTCG CCTTGATTCT GACGCCGCTG CTGGCGCTGC TGCAGTGGCT GCTGCCGGCG
TTCCCCTGGT TCCTCGCCGG TTTCGCGGCG ATCGCCGTTT CACTGACGCT CTACGAGCTG
CTGCACGCGA TCAATCATTG GCCGTTCGAG CAGTGGGAGC CGCTCATTCA ACATCCGCGC
TGGGGCCGGT TCTGGCAGCC GGCCTACGGC TTCCATCTGC GCCACCATGC GGTCACGGAC
TGCAACGAGT CGATCTCGGG GTTCTTCGGA CTGCCGGTGG CTGACTGGGT GTTCGGCACC
TGCGTCGTGC CACAAACCGT CTACGCCGAA GGCGAGGAGT GGTCGGAAGA GAAATTTCGC
AGCCCGCATC CACGCTGGAT CATCCGGCGG CTCGACGCTT GGGCCGAGCG TGTCGTCCAG
CGTCGGCGGG CGTCGAAGGC GGTCGCGGCT CCGCGGCCGC TCGAGCCCGC GATCGAGGTG
TCGGTGGCGC CGGAGCCGCG GGTGTACACG CGCTGGGAGG AGGCCGCCAA CTGGATCACG
CACGGGATAG GGTTGGTGCT AAGCGTGGCT GGCCTGACGC TGCTGATCGT GTTCTCCAGC
CTGCGCGGCG ACGCGTGGCA CGTGGTGAGT TTCACGGTCT TCGGGCTGAC GCTGCTGGCG
CTGTACGCGG TCTCCACCAT CTATCATCTG CAGCGCAGCG AGCGCGCGAA GTACGTTTTT
CGGAAGCTCG ATCACGCCGC GATCTTCCTG CTGATCGCGG GCACGTATAC GCCGTTCCTG
CTCACGAGTC TGCGCGGCCC CTGGGGCTGG ACGCTGTTCG GGGTGATCTG GGGACTCTGC
GGGGCCGGCG CGGTGTTTCA GCTTTTTTTC GGCGAACGGT ATCGGCTGAC CTCGACGGTG
GCCTATCTGT TTGTCGGCTG GCTCATCGTG GTCGCGCTCG AGCCATTGAC CGCCAGCGTG
CCGCACGGCG GGCTGTGGCT GCTGTTGGCC GGCGGGCTCT GCTACACGTT TGGGGTGGTA
TTCTACCACT GGCATCGGCT CCGCTTCCAC CATGCCGTGT GGCATGCCTT TGTGGTGGGT
GGCAGCACGT GTCACGTGCT CGCTGTGCTC CTGTTTCTGC TTCCTTCGCA CGCTTGA
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| Protein sequence | MPPQNRPPAG TDSEHEEFSL PLFVLTVLAT LAGLLAGLRL FAPQVWAQQF LAPVSHGIVA
FLVISLINCF MEYFFHRYVL HLPAVPFLRR LYKQHTLHHA LTRIARRKGR DGRGILFIEN
KFPIVEPEQG EASFFPWYSL AVFALILTPL LALLQWLLPA FPWFLAGFAA IAVSLTLYEL
LHAINHWPFE QWEPLIQHPR WGRFWQPAYG FHLRHHAVTD CNESISGFFG LPVADWVFGT
CVVPQTVYAE GEEWSEEKFR SPHPRWIIRR LDAWAERVVQ RRRASKAVAA PRPLEPAIEV
SVAPEPRVYT RWEEAANWIT HGIGLVLSVA GLTLLIVFSS LRGDAWHVVS FTVFGLTLLA
LYAVSTIYHL QRSERAKYVF RKLDHAAIFL LIAGTYTPFL LTSLRGPWGW TLFGVIWGLC
GAGAVFQLFF GERYRLTSTV AYLFVGWLIV VALEPLTASV PHGGLWLLLA GGLCYTFGVV
FYHWHRLRFH HAVWHAFVVG GSTCHVLAVL LFLLPSHA
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