| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1127 |
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| Symbol | |
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| ID | 6205705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1404392 |
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| End bp | 1407361 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690770 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001818015 |
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| Protein GI | 182412949 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02938] nitrogen fixation negative regulator NifL |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.476664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTTG CGCTGCTCCT GGTCTCCGTC GCGGCGTCGG AATCGCGCGG GGCGTCCACC
CGCAGCCTGA CGGCTGCCGG TACGTGGGAG CTATGGATCA TCCCCGCGGT ACTCGTCGTG
GCGGTCGCCA GCGCGGGTTG GGCGTGGTGG CTTTCGCGTC GCCGCTCGTC ACCGCAGGGC
GACGGCTCCG GCCGATTGCC CCACTGGTTG CAGCGCGCCG CCGATGCGGC GTTGTTGATC
GACGAGGACG GACGGGTGCT CGATGCGAAC CAACGCGCGC TCACCCTCTA CGGTTACACC
CTCGCGGAAA TGCAGGCGCT CGGTCCGGGC CACCTCGCCG TCAATCGCGG GGAGGAACTG
ATCCACCAGC GCACGCTGCG CGAGGCCGAC GATGGCCGCG TGATCGCGAC GCTGCACCGG
CGCAAGGACG GCTCCACCTT CGACGCCACG CTGAGCGGCG CGGCCTGCGT CACCCGCCGC
GGAGCCTGCC TGCTCGCGAC CGTTCATGAT GTTTCCCTGA TCAAGGCGGC CCAGCGGAAG
GTCGAGCGCA CGCGCCAGCT GCAGCTGATG CTCGCCCAGG TCAACCAGGC GATCATCCGC
GCCGAGTCGG CCGACCAGAT CCAGGAGATG GTCTGTCAGA TCCTGGTGGA AACCGGGCTC
TTCAAGCTCG CGTGGATCGG TCGGCTCGAC CCGGAAAGCG CGGCGATCCG ACCCGCCGCC
GCGGCGGGCG ACGACCACGG TTATCTGGAC GAAATCAGCG TCTATGCCGA CGACCGCGCC
GAGGGCCGCG GCCCGGTGGG CGCGGCGATT CGCGAAGCGC GTATCTCCGT CTGCAACGAC
TTCCTCGCGG CGGCGCACAC CAGTCCGTGG CACGAAGCGG CGGCGAAGCA CGGCCTGCGC
TCCTCGATCG CGCTGCCGGT GCGCGTCGCC GGCCAGGTCC GCGCGGTCCT GTCGGTGTAT
GCATCGAGCC CGAACTTTTT TGGCGAGGAC GAGACAGCCC TGCTCGAGCC GGTCGCGGCC
GATCTGTCGT TCGCCCTCGA CATGCTCGAG CAGGAAAAAA AGCGCGAACA GGCCGAGGCC
CGCAGTGTGT TGCTCGGCAC CGCACTCGAG GGCGCGCCCA ACGGCATTCT CATCACCGAC
CTGCACGGCA CGATCGAATG GGCCAACCCC GCCTTCGTCC GCGCGAGCGG TTATGCCGCC
GACGAGCTGG TGGGCAAAAA TCCCCGGCTG CTGAAGTCCG GCCACCATCG GTCCGAATTT
TACACCGAGC TGTGGCGGAC GATCCTCGCC GGACAGACCT GGCATGGCGA GGTCGTGAAC
CGCCGCAAGA ACGGCGAGCT TTACGTCGAA GATCTCACGA TCATCCCGGT GCGCAATGCC
GCGGGCGCGA TCCGGCAGTT CGTGGCGATT AGCCAGGACA TCACGGGCCG CAAGGGCGCG
GAGCGGCGGG TGCGCGAGCA GGCGGCGTTG CTGGACCAGG CGTCGGACGC CATTGTCGTG
GCGGATCTGA ACCATCGCGT TTCGTTTTGG AATCGCGGCG CCGAGCGGCT TTTCGGTACC
AGTGCCCGTG AGATGCTGGG CCGGACGCTC GAGGAGGCGT TCGCGCTCGA TCGCGACGTG
GGGCCCACGG CGTTTCACGA CGCGCTCGCG GAGCCGCGCG ACTGGCGCGG CGAACTGCGC
AGCCGCAACC AGGCCGGGCG AACGATGATC ATCGAGACCA GCGTCACCAT GCTGCGCGAC
GATCACGGCC AGCCCACCGG CCGGCTCTGC ATCAGCGCCG ATGTGACGCA TCGCAAGGCG
CTCGAGGAGC AGTTCCTGCG CGTGCAGCGG ATGGAAAATC TCGGCATGCT CGCCGCCGGC
ATCTCGCATG ACCTGAACAA CATTCTCGCG CCGATGCGCA TGGTCGGTCC GCTGCTGCGC
GACCGGTTGA GCGAGCCGCG CGACTTGCGG CTGCTTGACA CGCTCGAGAG CTGCGCCGCG
CGCGGCGCCG GTCTCGTGCG CCAGATCCTC GGTTTTGCCC AGGGCGTCGC CGGCGAACAC
CGGGTGGTCC AGGTGAAGCA TCTCTTGCGC GACATCACCG ACGTCATCGC GGCATCGTTC
CCGAAATCGA TCGTGCTCGA GGACGAAATT CCCGCGGATC TCTGGCCGGT GAACGGCAAC
CCCACCCAGA TTCACCAGGT GGTGCTCAAC CTCTGCGTGA ACGCGCGCGA CGCGATGCCG
GAAGGCGGCA CGCTGCGACT GCGCGGGCAG AACTGCCTGC TCGACGAGGA GACCGCGCGT
ACGATCGAAG GCGCGCGGCC CGGTCCGTGG CTGGTGCTGC AGGTCGAGGA CACCGGCACG
GGCATTCCGG CCGACGTGCT CTCGCGGATT TGGGAGCCGC TGTTCACCAC GAAAGCGCCG
GACAAAGGCA CGGGCCTCGG ACTCTCCACC GTCCGCGGCA TCGTGGCGCA GCATCAGGGC
TTGGTGACCG TAAAGACGGA AGTGAACCGC GGCACGACGT TCAGCGTGTA TCTGCCCGTC
GAGGAAACGG CGGTGACCGG CACCGGGACG GCGAGCCCCT TTGCCGCGAC CGCCGCGCGC
GGTGAACAGG TGCTGTTCGT CGACGACGAA GCGAGCATTT GCGAGCTCGC GACCGCCGTG
CTGAGCCGGC ACGGCTACCG CGTGCTCACG GCCCGGGACG GCGCGGAAGC GATCGCGCAG
TTCGCCCCGC GGATCGCGGA CATCGCGCTC GTGATCACGG ACCTCGACAT GCCGACGCTC
GATGGCGCCG CGCTCTGCCG CGTGATTCAC ACGCTGAGCC CCGACACGAA AATTCTGGCG
ACGAGCGGAT TCGTGCAGGC GGCGCCGCCC AAGGAAGCGT TCAGCGGATT TCTGCCCAAG
CCCTTCACGC CCGAGAAGCT CCTCAAGATC GTCGAGGAAG CGTTGCCCGC GAAGCGGGCG
GAGAGCACTG GCTCTGCGAA CCGTGCGTAA
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| Protein sequence | MSLALLLVSV AASESRGAST RSLTAAGTWE LWIIPAVLVV AVASAGWAWW LSRRRSSPQG
DGSGRLPHWL QRAADAALLI DEDGRVLDAN QRALTLYGYT LAEMQALGPG HLAVNRGEEL
IHQRTLREAD DGRVIATLHR RKDGSTFDAT LSGAACVTRR GACLLATVHD VSLIKAAQRK
VERTRQLQLM LAQVNQAIIR AESADQIQEM VCQILVETGL FKLAWIGRLD PESAAIRPAA
AAGDDHGYLD EISVYADDRA EGRGPVGAAI REARISVCND FLAAAHTSPW HEAAAKHGLR
SSIALPVRVA GQVRAVLSVY ASSPNFFGED ETALLEPVAA DLSFALDMLE QEKKREQAEA
RSVLLGTALE GAPNGILITD LHGTIEWANP AFVRASGYAA DELVGKNPRL LKSGHHRSEF
YTELWRTILA GQTWHGEVVN RRKNGELYVE DLTIIPVRNA AGAIRQFVAI SQDITGRKGA
ERRVREQAAL LDQASDAIVV ADLNHRVSFW NRGAERLFGT SAREMLGRTL EEAFALDRDV
GPTAFHDALA EPRDWRGELR SRNQAGRTMI IETSVTMLRD DHGQPTGRLC ISADVTHRKA
LEEQFLRVQR MENLGMLAAG ISHDLNNILA PMRMVGPLLR DRLSEPRDLR LLDTLESCAA
RGAGLVRQIL GFAQGVAGEH RVVQVKHLLR DITDVIAASF PKSIVLEDEI PADLWPVNGN
PTQIHQVVLN LCVNARDAMP EGGTLRLRGQ NCLLDEETAR TIEGARPGPW LVLQVEDTGT
GIPADVLSRI WEPLFTTKAP DKGTGLGLST VRGIVAQHQG LVTVKTEVNR GTTFSVYLPV
EETAVTGTGT ASPFAATAAR GEQVLFVDDE ASICELATAV LSRHGYRVLT ARDGAEAIAQ
FAPRIADIAL VITDLDMPTL DGAALCRVIH TLSPDTKILA TSGFVQAAPP KEAFSGFLPK
PFTPEKLLKI VEEALPAKRA ESTGSANRA
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