Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1103 |
Symbol | |
ID | 6205824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1368549 |
End bp | 1370144 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690746 |
Product | histidine kinase |
Protein accession | YP_001817991 |
Protein GI | 182412925 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.458922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGG CTCCTCCAGC CGGCGTGGAA AACCGGGTGC TGCTGTTTGT CCCCACGCGC AAGGATGCGG ACGTGAGCCG GCGGCTGCTC GCGCAAGCGG GATTGCCGGC GACGGTCTGC GTCTCGATGG CGGAATTGAC CGCTCGCATC GCGGAAGGCG CGGCCGCCGT GCTCGCCACG AGCGAAATGG TCGAAAGCAG CCAGGTCGAT GAATTGCTCC GAGTGCTGGC GGCGCAGGAG CAATGGTCGG ACCTGCCGTT TGTTTTACTG ATCAAGGGCG GCCCGCAGTC ACCGCGGGCG AACGAGATTC TGCAAAAGCT CACGAACGTG ACCCTGCTGG AGCGACCTGC GGGCATGCGC TCGGTACTCA GCGCGGTGCA GGCGGCGGTG CGGGCGCGGG TGCGGCAATA CCAAGGGCGC TCACAGATTC AGGCGCTGCG GGAGGCGGAG GCGAAGGCGC GGCGCGCCGA CCAGACCAAG GACCAGTTCC TCGCCGCGCT GTCGCATGAG TTGCGCACGC CGCTGACGCC GGTACTTCTT CTCGCCACGG AAGCCGCGGC CCAGCCGGCA CTGGACGCGC GGGCCCGACA GGACTTCGAG ATGATCGCGC GGAACGTGGC ACTGGAGGCC CGGTTGATCG ATGATCTGCT GGATCTGACG CGGATCAGCC GCGGCAAGAT GAAGCTGGAG AAACAGCCCC AAGACGTCCT CCACGTGTTG CGGGATGCGA TGGAAAACGT GCGGCCGGAT TTCGCCGAAA AACGACTCGA GCTGACGACG GTGCTGCCCG CGCTGTCGGC CGTGGTGAGC TGCGATGGCG CGCGGTTGCA GCAGGTTTTC TGGAATGTGC TCAAGAATGC GGCGAAATTC ACGCCCGTCG GCGGCAAGGT GACGATCCAG GTGCGCTTCG CGCCCGACGG AGCGCAGGTG ATCACGGAGA TCACGGACAA CGGGATGGGG ATGACCGCGG CGGAATTGGG CCGCGTCTTC GAAGCGTTCG TGCAGGGCGA TCATGCGAAC GCGGGCGGCG CTCACCGCTT CGGCGGGCTC GGGCTGGGCC TGGCCATCTC GCGCTCGCTG GTGGTCCTGC ACGATGGTTC GATCGAGGCG CAGAGCGATG GGCCCGGGCA CGGCACGACG ATCACGATCC GGCTGCCGCT CGCGCCCGCG GAGTCGGCCG GCGGGCCGGG AGGAGCGGAT CCCGACACGG CGCGCGCCGG GGCGCCGTTG CGGATCCTGC TCGTCGAGGA TCACGAGCCG ACCCGCAACG TGCTCAAGCG GCTTCTCGCC GCCCGAAAGC ACGACGTGAT CGCAGCCGCG ACGCTCGCCG AGGCGCGTGT GATTGCGCAA AACAACGTGC TCGACCTCCT CATCACCGAC CTCGGGCTGC CGGATGGGAA TGGGCTCGAG CTGATGCAGG AGCTCACCGC CCGCAGCGGT CTGACCGCGG TCGCACTCAC CGGCTACGGA ATGGATGACG ATGTACAGCG GAGCAAGAGC ACGGGGTTCT TCATGCATTT GACCAAACCA CTGCGAATCG CGGAGCTCGA CCGGATGCTG GCTGCCGTGG ACGAGCAACG TTCGCGTGCG GGATAG
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Protein sequence | MTLAPPAGVE NRVLLFVPTR KDADVSRRLL AQAGLPATVC VSMAELTARI AEGAAAVLAT SEMVESSQVD ELLRVLAAQE QWSDLPFVLL IKGGPQSPRA NEILQKLTNV TLLERPAGMR SVLSAVQAAV RARVRQYQGR SQIQALREAE AKARRADQTK DQFLAALSHE LRTPLTPVLL LATEAAAQPA LDARARQDFE MIARNVALEA RLIDDLLDLT RISRGKMKLE KQPQDVLHVL RDAMENVRPD FAEKRLELTT VLPALSAVVS CDGARLQQVF WNVLKNAAKF TPVGGKVTIQ VRFAPDGAQV ITEITDNGMG MTAAELGRVF EAFVQGDHAN AGGAHRFGGL GLGLAISRSL VVLHDGSIEA QSDGPGHGTT ITIRLPLAPA ESAGGPGGAD PDTARAGAPL RILLVEDHEP TRNVLKRLLA ARKHDVIAAA TLAEARVIAQ NNVLDLLITD LGLPDGNGLE LMQELTARSG LTAVALTGYG MDDDVQRSKS TGFFMHLTKP LRIAELDRML AAVDEQRSRA G
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