Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0953 |
Symbol | |
ID | 6204799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1168643 |
End bp | 1169767 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641690576 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001817841 |
Protein GI | 182412775 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA AAATCAATCG CGACCATTTC GCCAACGGAC TCGCTCAGGT GCTCAACGTC GTTGGTTCCA AGGCCACGAT GCCGATCCTC AGCAACGTGC TGATCGAAGC GGAAAAGGAT CAGATCTCGC TCACGACCAC GAATCTCGAC CTGGGCATCC GCTGCAAGAT CAAGGCCGAG GTGAAGGAAA CGGGGGCCGT GACCCTGCCG GTGAAACGGC TGGCGACGAT CGTGCGCGAG TTGCCGAATG TGGATGTGAC GGTGGACGCT TCGCCGAATC ACCAGGTGAA GCTCGCGTCG GGTGGCTCGA ATTTCCGCAT CATGGGCATC GGCAAGGAGG AGTTCCCGCC GCTGCCGGAG TTCGGCGAGG AAAAATCCTT CACGCTGGAG CAGAGCGAAC TCACCTCGAT GCTCAAGAGT GTGGCGTATG CGCAATCGAC TGATGAAACG CGCTACATTC TCAATGGCGT CTATTTCAAT TTCAAGGACG GCAAGCTTTC GCTTGTCGCG ACGGATGGCC GACGACTCGC GCTCGTGTCG AAGGAACTCG AGGTTCCGGC GGACAGCGCG GGCGCGATCA TTCTGCCGGC GAAGACTGTG TCGGAATTGA TGCGGCTGCT CGACAAAGGC GAGAAGCTAA AGATCAACTT TAACGATCGC CGGGCTGCGT TCCAAATTGC GACCGACAAG GACTCCAGCG GCCTGGTTGA GAGCGTCTAT CTCTACTCGA AGGTGGTGGA GGGCAATTAC CCCAACTACC AGCAGGTCGT GCCGAAGGAA ACGCACCAGC GCATCAAGCT CGAGCGCGAG CTCTTCCTGC AATGCGTGCA CCGCGCCGCG CTCGTGTGTT CGGAGAAATC GAACTCCGTC AAAATCAAGC TTTCGAGCAA TCTGCTCGAA ATCACCGCGC AAAGCCCTGA CTTCGGCGAA GCGCACGAAT CGATGGCCAT CGGTTACAGC GGGCCGGAGC TGCAGGTTGC GTTCAACCCG GCATTCGTGA TGGATCCGCT CCGCGCGCTC ACCAAGGACG AAATCTTCTT CGAACTGAAG GATGACGTCA GCCCCGGCGT GTTCAAGACG TTGGACAGCT TCCTTTGCGT CATCATGCCG GTACGCCTGA GCTGA
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Protein sequence | MKFKINRDHF ANGLAQVLNV VGSKATMPIL SNVLIEAEKD QISLTTTNLD LGIRCKIKAE VKETGAVTLP VKRLATIVRE LPNVDVTVDA SPNHQVKLAS GGSNFRIMGI GKEEFPPLPE FGEEKSFTLE QSELTSMLKS VAYAQSTDET RYILNGVYFN FKDGKLSLVA TDGRRLALVS KELEVPADSA GAIILPAKTV SELMRLLDKG EKLKINFNDR RAAFQIATDK DSSGLVESVY LYSKVVEGNY PNYQQVVPKE THQRIKLERE LFLQCVHRAA LVCSEKSNSV KIKLSSNLLE ITAQSPDFGE AHESMAIGYS GPELQVAFNP AFVMDPLRAL TKDEIFFELK DDVSPGVFKT LDSFLCVIMP VRLS
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