Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0944 |
Symbol | |
ID | 6205655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1158317 |
End bp | 1158670 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641690567 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_001817832 |
Protein GI | 182412766 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATT CGAAACTATA CGTCGGCAAT CTGTCCTTCA AGACCACCGA GGAAGAGCTC CGCTCCGCTT TCGGCCAGTT TGGTTCCGTG ACCGATGTCT ACGTTGCCAT GGACAAGATG ACCGGCCGCC CGCGCGGTTT TGCGTTCGTC ACCATGGGCA CGGCCGAAGA GGCGAAGGCC GCGGCGGAAA AGCTGAATGG CACCGATCTC GGTGGCCGTC AGCTGACCGT CAATGAAGCC CGTCCGAAGG AAGAGCGCCC CAGCGGCGGC TTCGGCGGTG GCGGCCGTGG CTTCGGCGGT GGCGGCCGTG GCGGTTTCGG CGGTGGCCGC GATCGCGGCG AGCGCCGTTA CTAA
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Protein sequence | MSNSKLYVGN LSFKTTEEEL RSAFGQFGSV TDVYVAMDKM TGRPRGFAFV TMGTAEEAKA AAEKLNGTDL GGRQLTVNEA RPKEERPSGG FGGGGRGFGG GGRGGFGGGR DRGERRY
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