| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0930 |
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| Symbol | |
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| ID | 6208314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1144484 |
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| End bp | 1145584 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690553 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001817818 |
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| Protein GI | 182412752 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC GCCTCGTGCT CACGCTGGTC GTCGCCCTCG CCGTTTTCGG CGCGATCTTT
GGCTACAAAT TTCTCACGAT TCGCAAGGCC ATGGCCGCGC GGGCCGCGAT GACGGTGCCG
CCGGTGACGG TCAGCGCCAC GGAAGCGAAG CGCGAAACCT GGCCCAACAC GGTTTCGGCC
GTCGGCGCAC TCGCGAGTTT CCGCGGCATC AACGTGAAGG CCGAACTCGA AGGCGTGGTG
CGCCGGATCG CGTTCGAGTC GGGCTCGGCG GTGGCCGCCG GCGACTTGCT GGTGGAACTC
GACACGTCGG TGGAGAGCGC GCAACTCGCC GGGCTCGAGG CGCAGGCGCG CTTGGCCGAA
ATCACTCTTA CCCGCGCGCG CGAATTGCGC ACGAACGGCA CGAACGCCCA GGCCGACCTG
GACACCGCGG AAGCGATGCT TGTGCAGACG CGCTCCGCCG TCGAACAGCT CCGGGCCACC
ATCGCCAAAA AGCGGATCGT GGCGCCCTTC GCCGGCAGGC TGGGCATCGC CCGCATTTAT
CCCGGGCAGT TCATTTCCAA GGGCGACGCG ATCGTGCAAC TCGAGACGCT GGATCCCATC
CACGTCGACT TCTCCCTGCC GCAACAGGAG CTCGGCCGGA TCAGCATCGG CCAGCAGGTG
AATGTTTCCA CCGACGTGCT GCCGAACCAG GCGCTCGCCG GCACGATCAC CGCGATCGAC
CCGCGCGTCA GTGAGACCAC GCGCTCGGTG CAGGTGCGCG CCACGTTCGC GAACCCGGAG
GAGCGGCTCC GCCCGGGAAT GTTCGCGCGC GTCGAAGTCG TCCTGGCCGC TTCGGAAAAC
TACATCGTCC TCCCGTCGGC GGCGATCGTC TTCAATCCGT ACGGCGACAG CGTGTTCGTC
ATCGAGAACG GTGTCGCGCA GCCCCGCTTT GTCCAACCCG GCCCGCAGCG CGGCGATTTG
ACGGCGATTC TCTCGGGCCT TCAGCCGGGT GAGCAGGTCG TCACCTCGGG CCAGCTGAAA
CTACGCAAGG GCAGCGCGGT CCGCGTCGAC AACTCCATCG CTCCGGAAGC GAATCCCGCT
CCGAAGCCCG TCGAGAGCTG A
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| Protein sequence | MKTRLVLTLV VALAVFGAIF GYKFLTIRKA MAARAAMTVP PVTVSATEAK RETWPNTVSA
VGALASFRGI NVKAELEGVV RRIAFESGSA VAAGDLLVEL DTSVESAQLA GLEAQARLAE
ITLTRARELR TNGTNAQADL DTAEAMLVQT RSAVEQLRAT IAKKRIVAPF AGRLGIARIY
PGQFISKGDA IVQLETLDPI HVDFSLPQQE LGRISIGQQV NVSTDVLPNQ ALAGTITAID
PRVSETTRSV QVRATFANPE ERLRPGMFAR VEVVLAASEN YIVLPSAAIV FNPYGDSVFV
IENGVAQPRF VQPGPQRGDL TAILSGLQPG EQVVTSGQLK LRKGSAVRVD NSIAPEANPA
PKPVES
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