Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0929 |
Symbol | |
ID | 6208478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1141300 |
End bp | 1144401 |
Gene Length | 3102 bp |
Protein Length | 1033 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641690552 |
Product | acriflavin resistance protein |
Protein accession | YP_001817817 |
Protein GI | 182412751 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCA CCGATCTTTT CATCCGCCGT CCCGTGTTGG CGACGGTGGT CAACCTCTTC CTGCTGATCA TCGGCGGACT GGCCATAAAA TCGATGGTCA TCCGCCAATA TCCGCAAACC AACAACGCCG TCATTCGCGT CACCACCACC TACCCGGGCG CGAGTGCGGA TCTGATCCGC GGCTTCATCA CCACGCCGCT CGAGCGCGAA ATCGCCTCGG CGGACGGTCT CGACTACGTC GAGTCGGTCA GCGCGCCCAA CGTCTCGATC ATCACCGCCA AGCTGCGGTT GAACTATGAT CCGAACGACG CGTTGACGCA GATCACCTCG AAGGTGAACC GCGCCCGCCG TGAGCTGCCC GTTGATGCGG AGGACCCCGT GTTCGACGTC TCCGTCGGCG AAAGCACGGC CTCGATGTAT CTGACGTTTT CCAGTGCGGT GCTGGGCGCG AACCAGGTGA CCGACTATCT CACCCGTGTC GTGCAGCCCA AGCTCTCGAC GGTCGAGGGC GTGCAGAAGG CCGAAATCAT GGGCGCGCGT ACGTTCGCGA TGCGCATCTG GCTCGATCCG GAAAAAATGG CGGCGTTCGG GCTCAGCGCC TCGCAGGTCT GGGCCAAGCT CTCCACGCAG AACCATCTCT CCGCCGTCGG CAAAACGAAG GGCTCGATGG TCTCGGTCAA CCTGACCGCC GGCACCGATC TTCAGTCCGC GGGGGAATTC CGCCAAATGG TCATCCGCGA AAACAAGGGC GAGATCGTCC GCCTGGGCGA CATCGCCAAT GTCGTGCTCG GCGCCGAAAG CTACGACGTG GACGTGAAGT TCGCCGGCCA GGAGACCACC ATCATCGCGA TCTCCGTCCT GCCCACGGCC AACTCGATCG ACGTCATCAA GGGCGTGCGC GCCGTCTGGC CGGAAGTCGT CAGCCAGCTG CCGGCCGGAC TCGACGCCGG CATCGCCTAC GACGCCACCG AGTTCATCAA CGACTCCATC ACCGAAGTGA TGGAAACGCT GCTCGAGGCG ATGCTCATCG TGGTGCTGGT GATCTACGCG TTCCTCGGCT CGTTCCGCTC GGTCGTGATT CCGATCGTCG CGATCCCGCT CTCGCTGGTC GGCGTCTGTG CCTTGATGCT GTCGCTCGGT TTCTCGATCA ACCTGCTGAC GCTGCTGGCG ATGGTGCTCG CGATCGGGCT CGTCGTCGAC GACGCGATCG TGGTGGTGGA AAATATTCAC CGGCACATCG AGGAGGGACT GTCCCCGCTC GATGCGGCGC TGAAAGGCGC GCACGAACTC GTCGGACCAA TCATCGCGAT GACGATCACG CTCGCCGCGG TCTATGCGCC GATCGGCCTG CAGTCCGGCG TCACCGGCGC GCTGTTTCGC GAGTTCGCCT TCACGCTCGC CGGCGCGGTC ATCGTGTCCG GATTCGTGGC GCTGACGCTG TCGCCGATGC TTTCGTCGAA GCTGCTGCGG CACAACCCGA ACCCCCGCGG CATCGAGCAT TTCCTCGACG TGGCCTTCAC GAAGCTCCGC GACCGCTACG AACATCTGCT CGACCAGGTG CTCAACACGC GGCCGGCCGT CTACCTCGTG GCGGTGCTGA TCGTGGCCGC GATCATGCCG TTCTACGCGC TGACGAAGAA GGAGCTCGCG CCGCCGGAGG ACCGCGGGTT CATCGTCACG ATCTCGCAGG GTTCGCCCAA CGGCACGCTC GATCAGGCAC TGCGCTATTC GGAACGGTTC AACGAGCTGC TGAAGCAGAT TCCTGAGGTG AACACGTTCT TCAGCATCGC CGGCTTCGAC ATGGTGTCGG GCATGGCGAG CCCGAGCTCC GGGCTGACCG GTGTCTCGCT CGTGCCGTGG AGCCAGCGTG AGGCGAGTGC GGCGGACCTC ATTCCGCAGA TCCTCGGACG CGCGAGCACC ATCGCGGGCG TGAACTATGC CGCGTTTCTT CCGCCGTCGC TCCCTGGCGC GGGCGGCGGT CTGCCGGTGC AGTTCGTCGT CAGCTCCACG GCCAACCACG ACCGCGTGGC CGTCGTGACG CAGACGCTGC TCCAGCGCGC GCTCGCCAGC GGCAATTTCC TTTACGGCGA CACCGACCTG AAGTTCGACC AGCCGCAGGC CGACGTCAAA ATCGACCGCG ACAAGGCTGC ATTGCTCGGC ATCGACATGA AGCAGCTCGG CACGGACCTC GGAGCGATGT TGGGCGGTGG CCAGGTCAAT CGCTTCGCGA TCCAGGGTCG GGCGTATCGC GTCATCCCGC AGGTCACGCG GTCTGCCCGG CTCACGCCGG ACCAGCTCGC CGACTACTAC ATCTCCACCG GCAAGGGCGA ACTCGTTCCC CTCTCGTCGG TCGCCGAAAT CGTGCCGACG ACGCAGCCGC GCGACCTCCG TCGGTTCCAG CAGCTCAACT GCGCGACCAT CTCGCTGCTC CCGCGGCCCG GTCTGTCGAT GGGTGAGGCG CTCGACTGGC TCAACGCCGA GGCGAAGACC GTCTTTCCCG AGGGTTTCGC GAGCGAATAC AAGGGCGAGT CGCGGCAATT CGTGCAGGAA GGCAGTTCGC TGATGGCGAC GTTCGTGCTC GCGATCGTGG TGATCTTCCT CGTGCTCGCC GCGCAATACG AGAGCTTCCG CGATCCGTTC ATCATCATGA TGGCGGTGCC GCTTTCGATC GCGGGCGCGA TGGTATTCCT CTTCCTCGGC GTGGCCACGC TCAACATCTA CACTCAAGTC GGCCTGATCA CGCTGGTGGG ACTGATCACG AAGCACGGCA TTCTCATGGT CGACTTCGCG AACAAGCTCC AGGAGGAGGG TCACGAGGTG CGCAGCGCCA TCGAGCACGC CGCTGGCATC CGGCTGCGTC CGATTCTGAT GACGACCGCA GCGATGGTGC TTGGCGTGCT GCCGCTGCTG GTGGCCCAGG GCCCCGGAGC GGAAGCGCGC TTCAGCATGG GTCTGGTGAT CGCCGCCGGC ATGGCGATCG GCACGTTGTT CACGCTCTTC GTGGTGCCCG CGTTCTACGT CCTCGTCGCA CACCGGCGCA CCGCCATCCC GGCGGGCGCC CCAGCCTCGC CCACGGAGCT CGCGCCCGCG CATCATTCCT GA
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Protein sequence | MRFTDLFIRR PVLATVVNLF LLIIGGLAIK SMVIRQYPQT NNAVIRVTTT YPGASADLIR GFITTPLERE IASADGLDYV ESVSAPNVSI ITAKLRLNYD PNDALTQITS KVNRARRELP VDAEDPVFDV SVGESTASMY LTFSSAVLGA NQVTDYLTRV VQPKLSTVEG VQKAEIMGAR TFAMRIWLDP EKMAAFGLSA SQVWAKLSTQ NHLSAVGKTK GSMVSVNLTA GTDLQSAGEF RQMVIRENKG EIVRLGDIAN VVLGAESYDV DVKFAGQETT IIAISVLPTA NSIDVIKGVR AVWPEVVSQL PAGLDAGIAY DATEFINDSI TEVMETLLEA MLIVVLVIYA FLGSFRSVVI PIVAIPLSLV GVCALMLSLG FSINLLTLLA MVLAIGLVVD DAIVVVENIH RHIEEGLSPL DAALKGAHEL VGPIIAMTIT LAAVYAPIGL QSGVTGALFR EFAFTLAGAV IVSGFVALTL SPMLSSKLLR HNPNPRGIEH FLDVAFTKLR DRYEHLLDQV LNTRPAVYLV AVLIVAAIMP FYALTKKELA PPEDRGFIVT ISQGSPNGTL DQALRYSERF NELLKQIPEV NTFFSIAGFD MVSGMASPSS GLTGVSLVPW SQREASAADL IPQILGRAST IAGVNYAAFL PPSLPGAGGG LPVQFVVSST ANHDRVAVVT QTLLQRALAS GNFLYGDTDL KFDQPQADVK IDRDKAALLG IDMKQLGTDL GAMLGGGQVN RFAIQGRAYR VIPQVTRSAR LTPDQLADYY ISTGKGELVP LSSVAEIVPT TQPRDLRRFQ QLNCATISLL PRPGLSMGEA LDWLNAEAKT VFPEGFASEY KGESRQFVQE GSSLMATFVL AIVVIFLVLA AQYESFRDPF IIMMAVPLSI AGAMVFLFLG VATLNIYTQV GLITLVGLIT KHGILMVDFA NKLQEEGHEV RSAIEHAAGI RLRPILMTTA AMVLGVLPLL VAQGPGAEAR FSMGLVIAAG MAIGTLFTLF VVPAFYVLVA HRRTAIPAGA PASPTELAPA HHS
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