Gene Oter_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0828 
Symbol 
ID6206182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1010089 
End bp1012023 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content68% 
IMG OID641690451 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001817716 
Protein GI182412650 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0428493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCTG GTTTTCGCGT GCTCTACGCC GAGGACAACC CCCTCGACGC GGATTTGACG 
CGGGCGCATT TCACGCGCGT GGCCCCGGAG ATCACGCTCG AGGTGGTGGA CCGGGCGGAG
GAATTCATCA CGCGCGCACG GGCCCGGCGG CACGCGGCCC TGCTCATCGA CCGGCGGGTA
CGGGACATGG ATGCCCTCGA GGTGCTGAAG CTGCTCGCAC TGGAGAGCAT CGATACACCG
CTCGTGCTCA TTGGGGGGAT CGGCGACACG GAGTTTGCCG CGCAGGCGCT GCGACTCGGG
GCCGACGATT TCGTGTCGCG CCGCCTTGGT TATCTCGAGT CGCTCCCGCA GCGGCTGCGC
GACGCGATCG AACGACACCG GCTGCAACCG GCGTTGGCGC GCGCGCGTTC GCGCCCGCGG
CGGATTCTGC TGGTCGACGA CGATCCCGCG GAGGCGGAAA TGCTGGTGCG GCTGCTGGCG
CGCCGCGCGC CGCACCTCGC GATCAAAACC GCGGCCAATC GGAGCAGCGG GCTCGAGGCC
CTGGTCACCG GCGAGGAATA CGACCTGGTG CTCGGTCTGC ACCGGCCACC GGCCAACGAC
TGCTTCGAAC TGATCAAGAC GGCGCGCGAT CGCGGTTTTC ACCTGCCGAT CATCGTGCTG
GCCGATTCCT CGGCGGAGGA AGCAGTGGCC GCCGCCTTCA GTCATGGTGC GAGCGATTTC
GTCGTCGCGC CGCGACGGCA CGCGGCGGAG CTCGCGCTGC GCATCGATCT CGCGATCGAT
CGGCACGAAC TCGCCGTGGC CGGACTGCGG GCCCGGACGG AGCTGGCGGA CCGGCGACAG
CTGCTCGCCG CGCTCGGGGC GAGCGATCAG CGGCTGAAGA CCGCGCTCGA GGCGGGCCGG
ATCGGTTTGT GGTCGTGGGA GGTGGGCACG GGGCACATGG AGTTCTCCGC CCGCTGGAAG
GCGCAGATCG GCTATGCGGA AAACGAGATC GGCGAGGACG CGGCCGAGTG GTTCTCGCGC
TGTCACCCCG ATGACCTCGC GAACCTCCAC ACGTTGACCG CCCGCTATCT CGCCGCGCCG
TGGCCGGACT TCAACGTCGA GTATCGGCTG AAACACAAGG ACGGCAGCTG GCGGTGTTTT
CTGCTGCACG CCGCGCTGGA AACGGACGAC CCGGGCGAGC CGCGGCGGAT GGTCGGCGCA
CAGATCGATG TGACGCAGTT GAAGCAGCAG CAAGCGGACA TCGCGAGCAC GTCGGCACGA
CTGCAGCAGC TGTCGCGGCG TTTGCTCAAC GTGCAGGAAA TGGAGCGACG CAGCCTCGCG
CGGGAGCTGC ACGACGAGAT CGGGCAGGTG CTGACGGTGG CCAAGATCCA TCTGCAATCC
ACCGTGCTGC TGCCGGAATG CGGCCGCGTT GCCGGGCGGC TGAAGGAGCC CGTGGCGCTG
CTCGACCGGT TGCTCGCCCA AGTTCGTTCG CTTTCGCTCA ATCTGCGTCC ACCGCTGTTG
GACGATCTCG GACTCGTTCC CGCGTTGCAC TGGTTGTTGC ACCAGCACCA ATCACACACC
GGCGGTCCCC GCGTGCACCT CGCGACGGAT CCCGAGCTGG CGCGGTTCGA CCCGACCCTG
GAAACCGCCT GCTTCCGCAT CGCGCAGGAG GCGCTCACCA ACGCCCTGCG GCACGCCCGG
GCACAAGGGG TGCATTTGAC GCTGACGGTG CAGGATCAGA AACTCCGGCT GCGGGTGCAG
GATGATGGCG TGGGCTTCGA CGCCACGAGT GCGCGGGGGC GCGCGGAACG AGGCGGCAGT
CTCGGGCTGC TGGGCATGCA CGAGCGGGCG TTGCTCGCCG GCGGCACTCT TACCCTGCTC
TCCGCACCGG GACGCGGCAC CGAGATCGAA GCGATTTTTC CGCTGTCCAT CCCCCCCGGA
TCTCGGCTAG TTTGA
 
Protein sequence
MRPGFRVLYA EDNPLDADLT RAHFTRVAPE ITLEVVDRAE EFITRARARR HAALLIDRRV 
RDMDALEVLK LLALESIDTP LVLIGGIGDT EFAAQALRLG ADDFVSRRLG YLESLPQRLR
DAIERHRLQP ALARARSRPR RILLVDDDPA EAEMLVRLLA RRAPHLAIKT AANRSSGLEA
LVTGEEYDLV LGLHRPPAND CFELIKTARD RGFHLPIIVL ADSSAEEAVA AAFSHGASDF
VVAPRRHAAE LALRIDLAID RHELAVAGLR ARTELADRRQ LLAALGASDQ RLKTALEAGR
IGLWSWEVGT GHMEFSARWK AQIGYAENEI GEDAAEWFSR CHPDDLANLH TLTARYLAAP
WPDFNVEYRL KHKDGSWRCF LLHAALETDD PGEPRRMVGA QIDVTQLKQQ QADIASTSAR
LQQLSRRLLN VQEMERRSLA RELHDEIGQV LTVAKIHLQS TVLLPECGRV AGRLKEPVAL
LDRLLAQVRS LSLNLRPPLL DDLGLVPALH WLLHQHQSHT GGPRVHLATD PELARFDPTL
ETACFRIAQE ALTNALRHAR AQGVHLTLTV QDQKLRLRVQ DDGVGFDATS ARGRAERGGS
LGLLGMHERA LLAGGTLTLL SAPGRGTEIE AIFPLSIPPG SRLV