Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0797 |
Symbol | |
ID | 6207632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 973121 |
End bp | 975601 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641690420 |
Product | immunoglobulin I-set domain-containing protein |
Protein accession | YP_001817685 |
Protein GI | 182412619 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.431236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCCA TTCATTCCCG CTTGGTCCGC ACCGGACTGT TGCTCGGCGC CTTGGCGTTT TCCAGCTTCG CGTCGCTGCA CGCGCAAACG CTGTTCGGCT CGGACGATTT CAACGACAAT ACGCTCACGA TCGGCGCTGG CCTCCGCTGG CGGTTCGAGA CTGACGTCAG CGGGAGCGGC GGCGCGTTTG CCGAGCGCAA CCAACGGCTG GAGTTTACCG CGGCGCAATC CACGGGAGCG ACGACACGCG CGCTCGGTTG GATCAGCCCG AGCACGAGCG GCGAATCGTT TGGCGTCGAC TGGCAGGCCA CGGTGAAGGT GTCCAACTCG GCTGCGCCGG CTGCGGGTTT CGCCTCCGCC GGACTCGAGG CCTACACGCT CGCGGACACC GGCGGCGGCA ATATCAGCAG CAGCGCCTAC TACGGGGCGT ATCTCTCGAC CAGTGCGAGC AGCGGCAAGC AGTTGGTCGC GGAGTGGGGG CGGTGGGACG CGACGCTGAA CGGCGGGAGC GGCGGCTGGG TGCGGAACAC GCAGGGAATC CCGATCGCCG CCACGGCGAA CGTTCTCCTG CGGCTGACTT GGATCGCGGC CACGCGGACA ATGACGGCTT CTTTCAGTAC GGATGGCGGC ACGCGGTTCG AGGCGGTGCG ATCGTTCGCG CTTGCCGGTG CCGAGGCAGG GATTGGCGCG CCCTATGCCA ACGGCTTCGG CTTGCAGCTC GTCGGGGTGG CGCCGACCAG CGGCGCGATC GCGGCCGGTC AGATCACTTT TGACGATATG AGCGTGTCTC CGCTGGGCAC TGGCCGGTTC GCCGGTTCTG ACGATTTCAG CGGCGGTGCT GACAAGTGGG AGTTCTTCTT TCGGCTGCCG TATCTGACGG AAGGCACGAA CGGACTGGGC ACGTTCAACG GGTCCGCGTT CGAGTTCACC AAGGGCGCTG GCAAGGGCAG CTACCTGCTG GAGTGGGACG GTGACGGCGT TCCGAAGAAC AACGTCGCGC GGACGCTGGC AAGTTACACG ACGAGTTGGG TGATGGACGT GACCGCCACG AATCGGCACG TACCGGAGTC CGGCACCTTC TCCGCCGTGA GCATCGAGGT CAGCGCGGGC GTTGATTCCT ACTACGAGAT TTCGCTGTTC AGGACCAATA GCCAGCTGGT GGTGCGCGCT GAAGCCATGA GCCCGTCGGA TCCAGGCGTG AACCTGACCG CGCCGGAGAA TGCAGGCGTG CGGCTGCGGA TCGCGTGGGA CGCCACCACG AGACTCCTGA CGGCGAGCTG CAGCTTTGAC GACGGTGTCA CCTATTCGAC GCTGCGCACG ATCGCGACCT CCGATTGGCC GACGCTCTCG ACGGGCGGAT TCTATTTTCA GGCGCTCGGC TTCTCCACCA GCGCCGCGCC TATTGGAACG GGACAGCTGT TGCTGGACGA TTTCTCAGTC AGAGCCGCTC CGACCGTCAC GGCCCAACCT GCCAGTCAAG CGCTCGCCGC CGGCGCCCCG GTCGTGCTCA ACGTGGCGGC GGACGCCACG GCGACATTTC AGTGGCAGCA AAACGGCGGA GCGGTCGCTG GCGCCACAAC TGACACGCTG ACGCTCGACA GCGTGCAGCC CGCCCAAACG GGGCTATATC AGGCGCTGGT CACCAGCCCG GGCGGCGTGA CGGTGAGTGG CGCGGCCATT GTGGGCGTAA CCACGACGAG CAAGGTGATT GGCACCGGCG AGGAAATCGG CGCGAATATC AGGCACTCGA ACGGCAACGT GTTCGATCAG GTCGCCGTGA CGGGTGCGGC GGAATCGATC ACGGCGGATT TTGCAGCGAA TCAGATTACG CGGACATCGT TCATCGATGC CGACAATGAC ATCGTGCAGA TCGAGTTCAG CGGTCCCGGC ACGCTCTCGC TGGTGTTGGA CGCGCCGTCG GGGCCGGCAC TGCCGGTGAA CTACAATCAA AACTTCAGCT ACATGAAGGG CCATGCGGGG ATTGTGATCA CCGGCGCGAC CGAGCAGACG AACCTGTCGG TGTTTACCGT GGGCCGGGCG ACGGCGGTGA ACCAGACGCT GTTCAAAGAC GGCGTGAACT ACGACGGGTT TGCGGACATC GCCTTCATCG CGATCCAGAG CAGCAACGGC CGGTTCGGCG GCGTGCGGAC GGCAAACGCG ACGTATTTCG CCAGTAAGGG GCTCACCGGG CTCTACGCAC CCGGGGTGAC GTTCGACGGG CCGGTCTATC TTGGCGACAT CACGGCGTTC GACGAGGCGA CACCGGTGCT CGTGATCGGC AGCGCCAACG GCAACACGTG GATCACGGGC GGCGACCTGG AGCAGGCCAA CGGCCGACCC GTGCAGGTCA GCGGGTTGAC GCAGCTGCAG TTCCAGCCCG GCAGCGATTC GCACGGCAAC ACGCTGTCCG CGCGCACGAA CCAAGCCCGG CTCGAGCAGG ACGGCACCGA CGTGACCACG CAGATCGCGG TGAACCCGTA A
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Protein sequence | MLPIHSRLVR TGLLLGALAF SSFASLHAQT LFGSDDFNDN TLTIGAGLRW RFETDVSGSG GAFAERNQRL EFTAAQSTGA TTRALGWISP STSGESFGVD WQATVKVSNS AAPAAGFASA GLEAYTLADT GGGNISSSAY YGAYLSTSAS SGKQLVAEWG RWDATLNGGS GGWVRNTQGI PIAATANVLL RLTWIAATRT MTASFSTDGG TRFEAVRSFA LAGAEAGIGA PYANGFGLQL VGVAPTSGAI AAGQITFDDM SVSPLGTGRF AGSDDFSGGA DKWEFFFRLP YLTEGTNGLG TFNGSAFEFT KGAGKGSYLL EWDGDGVPKN NVARTLASYT TSWVMDVTAT NRHVPESGTF SAVSIEVSAG VDSYYEISLF RTNSQLVVRA EAMSPSDPGV NLTAPENAGV RLRIAWDATT RLLTASCSFD DGVTYSTLRT IATSDWPTLS TGGFYFQALG FSTSAAPIGT GQLLLDDFSV RAAPTVTAQP ASQALAAGAP VVLNVAADAT ATFQWQQNGG AVAGATTDTL TLDSVQPAQT GLYQALVTSP GGVTVSGAAI VGVTTTSKVI GTGEEIGANI RHSNGNVFDQ VAVTGAAESI TADFAANQIT RTSFIDADND IVQIEFSGPG TLSLVLDAPS GPALPVNYNQ NFSYMKGHAG IVITGATEQT NLSVFTVGRA TAVNQTLFKD GVNYDGFADI AFIAIQSSNG RFGGVRTANA TYFASKGLTG LYAPGVTFDG PVYLGDITAF DEATPVLVIG SANGNTWITG GDLEQANGRP VQVSGLTQLQ FQPGSDSHGN TLSARTNQAR LEQDGTDVTT QIAVNP
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