| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0729 |
|---|
| Symbol | |
|---|
| ID | 6204524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 900240 |
|---|
| End bp | 900548 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690353 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001817618 |
|---|
| Protein GI | 182412552 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
|---|
| TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.125003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.951229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAT TCCCGCTCAC CGGCGCCCAA CGCACGTTCC TTCGCGGACT CGGCCAGCGG
CTCGAGCCTG CATTGAAAGT TGGCAAGGGC GGGCTCACGC CGGCGTTTTA CTCCGAGCTC
CAGAAGCAGC TGCGCGCACA CGAACTGGTG AAGCTGCGCT TCCTCGGCGT GGAACGCGAC
GAACGCGCCA GCCTCTGCGA CGAGATCGCG GATCAGGGTC GCTGTGTGTG CGTGGGCTCG
GTCGGACACA CGGCGTTGTT CTACCGCCAG AATCCCGAGC CCGCCGAGCG CAGCATCGCG
CTGCCGTAG
|
|---|
| Protein sequence | MYEFPLTGAQ RTFLRGLGQR LEPALKVGKG GLTPAFYSEL QKQLRAHELV KLRFLGVERD
ERASLCDEIA DQGRCVCVGS VGHTALFYRQ NPEPAERSIA LP
|
|---|
| |