| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0681 |
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| Symbol | |
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| ID | 6204422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 836714 |
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| End bp | 837937 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641690304 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001817570 |
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| Protein GI | 182412504 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.524718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTTGC GAGCGTGCAT TGCTAGCGTT TGCGTCGTGA CCATGGCTCT CATCTCGTCG
GCTGCATCGG GTCCAGGTGC CGCGACCCGT ACGGATGCAT CCAGGAAAAG CACGGGCAAT
GTCCGGGCGG CGCAAGCATT GGCGAAGCAG AAGGCGCTCG AGAAGAAGGC CAAGAAATAC
AAGCTGCCGC TGGGTGAACT GGCGATCTTC ACGCAGCAAC TCGCCTCGTT GCTCATCGCG
GGCCTGCCGT TGGTGCAGTG TCTGGAAGCG CTGCAGGACC AGACCGAGGA CCCGTGTTTC
CGGATCATCA TCCGCGATGT GCGTGCGGAC ATCTCGTCCG GCAACTCGTT TTCGTCGTCG
GTGAAAAAAT TCCCCAACGC CTTCAACAGC CTCTTCGTCT CGATGGTCGA AGCCGGCGAG
GCGAGCGGTG GGCTGGCCGA GATTCTGGGC AAGGTGGCCA GCTACTTCGA GTCCACCGTG
CGGCTGACGA AAAAGGTGAA GTCGGCGATG ACCTATCCGA TCGCGGTGAT CGGCTTGGCG
GTCGCGTTGG TCAACGTGCT GCTGATCTTC GTGATTCCCG TGTTTGCGTC GATGTTCGCG
GACTTCGGCG CCAAGTTGCC GGCGCCCACG CAGGCACTGA TCGATCTCTC GGAGTTCATG
AAGGCGTATT GGTGGGCCAT CGGACTCGGC TGCTATGGGC TTTATTGGTT TATCAAGAAG
TACGTTTCGA CCCCGACGGG CCGCCGACAG AAGGACCAGT TCCTGGTGAA GGCGCCGATT
TTTGGGAACC TCATTCACAA GATCGCGCTG TCCCGTTTCT GCCGCACCTA TGCCACGCTG
ATTCGCTCCG GCGTGCCGAT TCTGCGCACG CTCGAAATCG TTTCCGCCGC GAGCGGCAAG
GTGCAGATTG AGGAGGCTTG CGTCGAAATC ACGCGGCATG TGAGCCAAGG CGGTCAGGTG
TCCGAGGTGC TCGCCGCCAA TCCCTTCTTC CCCCCGATGA TGAAACATAT GGTGAAGGCC
GGCGAGTCGA CCGGCAACGT CGACGGGATG ATGACAAAAA TATCGGATTT TTACGACGTC
GAGTGCGAGG CGACCGTGGC CGCCCTGACC TCGCTGATTG AACCCTTACT CATTGTCTTC
CTTGGCGTCG TGGTCGGCGG CATCGTCATG GCGATGTTCC TGCCGATCTT CCAACTGGGC
GCGGTTGCCG GCGGACTGCA GTAA
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| Protein sequence | MGLRACIASV CVVTMALISS AASGPGAATR TDASRKSTGN VRAAQALAKQ KALEKKAKKY
KLPLGELAIF TQQLASLLIA GLPLVQCLEA LQDQTEDPCF RIIIRDVRAD ISSGNSFSSS
VKKFPNAFNS LFVSMVEAGE ASGGLAEILG KVASYFESTV RLTKKVKSAM TYPIAVIGLA
VALVNVLLIF VIPVFASMFA DFGAKLPAPT QALIDLSEFM KAYWWAIGLG CYGLYWFIKK
YVSTPTGRRQ KDQFLVKAPI FGNLIHKIAL SRFCRTYATL IRSGVPILRT LEIVSAASGK
VQIEEACVEI TRHVSQGGQV SEVLAANPFF PPMMKHMVKA GESTGNVDGM MTKISDFYDV
ECEATVAALT SLIEPLLIVF LGVVVGGIVM AMFLPIFQLG AVAGGLQ
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