| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0638 |
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| Symbol | |
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| ID | 6208180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 777158 |
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| End bp | 781015 |
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| Gene Length | 3858 bp |
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| Protein Length | 1285 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690261 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001817528 |
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| Protein GI | 182412462 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC GGCTCGTATA CTTTCTCGGA GCTGCGCTGA GCCTGCTGGC TCTGCATCGC
GCGGTCGCCC AGCAACCGAT CGTGTCGGTC AGCATCACTG CGATCCAAGT GGGCGCGGGC
CCGTGGATCA CCGATCCGAA TGAGAAATCC GGACCGTTCG GCACGCCGTT GCAGATCGAG
GCGGCCGGCG TCGGCACCTC GATGGCGAGC AGCTTCACCT ATTCCTTCTA TGTGAACGGA
ACGCACATCG GCACGACCAC GGCTCCCGTT CCACCGCCAC AGCGGCCGGT GATCACGTGG
ACCCCGCCGC AGCCAGGCTC GTATTTTCTG ACCGTCACCA TTGCGGACGG TAACAACACC
GCGACATCGC TGCCGGTCCG CTATTTTGCC ACGGGGTCGG TGATCAACAG CCCGGTGAAC
GGCACGCTGG TGCCACAAGG TTCTTCTGTG GTGTTGAAGG CCGATGCGAC TGTGACAGGC
GGGTTCATCA AGCAGATCCA ATTTTACGAC AACGGCGAGA AGATCGGTGA AGCTGACGCG
ACGCTGCCCT ATTCGCTGAT CTACACGCCG CCCGGCGTGG CCGGCAGCTC CCGCAGCATT
ACGGCTCGGG CGATCGACAA TACGGGAACG GAACAAGCGG CAAGCACGCC GATCTTGCTT
AAGATTGTTG AGGCGATCAC GCCTCGGCCT ACCTCCGCGA TCAGTTCACC GCTGAACGGC
AGCGCTGTGC CCGTCACGAT CGACAACGAG GATGTGGTCA CGGTGACTAT CGATGCGGCC
AGCACGACCG GCCGAATTTC GAAAGTTGAG CTCTACATCG ACGGCGAGCT GTTCGGAACC
GACAACACCT ATCCTTACAC CTTCGACTGG AAGCCGACGG TGGTCGGCGC CTACGGCCTC
GTGGCGCTAA CCTACGACGA CAAAAACAAC GTCATCGCCT CGCGTGCGGA TGACAGTGGA
TCGACGACTC CACCCCCCAC GCGGGTCCGG GTCGCGGCGC CGCCGACGGT CACAATCATC
TATCCCAGTA ACGGCGGGAC GATCTTTGAG GGCATCACCA CGCAGCTCAA AGCCGCCGCA
TCCGACAGCA ACTCGGTGGA AGGCGGGATC CCCGTCACCA TCACGTCCGT CCAATTTTTC
GATTCCGGCA CGTTCGTCGG CAGCGCCACG ACCTCCGCCG ACGGCTCGAC CTATACCGTC
TCGTTCAAAC CCACGCGCCG GATGGACGAA GACGGAGTGC CGATCCCGTC GAGTTTCACC
GCAGTCGCGA CGAACAGCGC TGGACTCAGC CAGAGTTCAA AGCCGGTCAG CGTCACGGTG
ATGCAGGGTG GCAGCCCGCC GCCGCCGCCG CCCGACGGCA TCCCGCCGGT GATCACGCTG
ACGCAACCGT ATTCCGGTCA GACCATCACG GTGAACACTC CGGTGACCTT CACCGCGACG
GCCTCCGACG CGGACGGCAC CATCACCTCG GTGCAGTTCG TGGTGAACGA CACCGTGCTT
TCCACCGATC AAGTCTATCC TTACAGCGCT ACGTGGACGC CAACCGCTTT GGGCAACTAC
TCGATCACGG CCGTGGCCGC TGACAGCAAA GCCAACAGCG TCACTACCAC ACCGGTGATC
GTGACCGTCG TGGATCCCAG CGTGAGCGGT CCGACCGTGA GCATCGCCCG GCCCCTGGCC
GGGACGCCGT TGACGGCGAA CAATCCCACG ACGATCCAAG CGAACGCGAC CGACGACACG
GCGATCGCGA GCGTGCAGTT TTATATCAAC GGAAAGCCGT TGGGGCCGGC GGATACGACC
TATCCCTATA GTGCGGATTG GCTGCCGGCT TCGCCCGGCA CCTACACGGT CGTGGCTCGC
GCCATCGATG AAGTGGGCAA TCAAACCGCC TCGTCGCCCG TGACGGTGTC CGTGACGAAC
GGCGCCGCGC CGATCGTGAC CCTCGATTCG CCTCGCGGTC CGACAGTCGT TTCGGCCGGT
GTGGCAGTCA GCCTGGCGGC GACCGCGGGA GATCTGGACG GCACCGTCAC GACGGTGCGA
TTCCTCGCCA ACGGGATCTC GGTCGGCACG GTGACGGCGC CACCTTACAT CGGAAGCTTC
CGGCCGACAG TCGCCGGCTA TTACTCGTTG CAGGCCGAAG CCGTCGACAA CGCCGGCAAC
ACGACCATCT CGAGTGCGGT GGCGCTATCC GTGCTGGCCA ACCAAGCGCC GGTGCCTACC
GTCACCGCGC CCGCGAACGG CGCGACCGTG CGCCTGGGCG TTGCGACGAC GCTCGTCGCC
GCGGCGACGG ATGCGGATGG CATCGTGGCC GGAGTGGAGT TCTTCGTGAA CGGCGTTTCC
GTCGGATCGG CGACCCAGCC GCCTTACAAG GTGCAGTGGA CGCCGACTGC GGAAGGCGTT
TATCGGATTG CGGCGACCGC GAGTGACAAT GCAGGCGCGG TTGCTACCTC GGCTCCGCTG
CTGATCACCG CTTCGCTCAC CGCTGCCGAC ACCGTGGCGG TCGGCACGTA TCAAGGTGGC
GGGGAGGCGG GGAAGTTTGC GTTCGTGGCG GCAACCGGGG CGGAGGCCAA CTTCATCGGC
TACTCGACGC TGGCGTCGCA GCCGAAGACG TATTTCTACA CCAGTGTGCC GATGGACATT
GCCGGCGGCT TCCAGCTGGA CAACGCCGGG CAGCCCGTGC TCTCCGGCCG GTTGAATGAT
ACCGGCGTGA GCGGCACGTT GGACAACGGT CGCGTAATGT TCATTGGGAC GGATACCAGC
TTCTTCCCGA GCGGACACCC GGTAGCAGCC GGCTATTACG CGGGACGGTT TACCGGCCGG
GATGCGAGCG CGGTCGCCGC GATCGTGGGC GAGGATGGAT CCATCACGAT CCGGTTTGCG
GATGGCGCGT TCCAGGATGC GGGTGGCGGC ACGCCGGGAA TGATCGACAG CACGGGAGCG
TTCAGCTTCT CCACCATGAG TGGGAATCGT GTTTCCGGCC GGATCGATCC CGCCACGGGT
GTGTTCACCG GCACGTTGAC GGGCTCGAGC GGGGGCACTT TCACCGCCTC TTCCTCCTCG
CTGCAGCCGG CGAGCACCAC GAAGATTCAG GGCATGGCGC GCGAAGTTAA GTCCGACATT
TCCTATGGAG GTCGCGTCTA CGACCAAGTT CTGCTGGAAG GGGCGAGCGC CAGCATCGCG
GCCGATCCCG GACAGATCAC GCGGATTTCC TACGCGGATC TCAGCCAGGA CATCGTGCAG
GTGGAGTTTT CCGGTGCGGG TCGGCTGTCA ATCTCGTTGG AGAACGCCAC GGGTCCGACG
ACGAACACCT CCTACAATCA AGCCGACGTG CGCTACATGA AAGGCCATGC CGGCATCGTG
ATCACGGGAG CTGACGAAAC GACGAACGTC AGCGTCTTCA CGGTCGGCAC GATCACGGCA
GCCAACCAGT CGCTGTTCAA GAGCGGGGTT GCGTATGACG GAACGGCCGA CCTCGCCTAC
CTCGCGATCG TGAGCACAAG TGGCCGGTTT GGAGGCGTCC GGACCGCGAA CGCCAACTAT
GTGGCGTCTT CCGGTTTCGC CGGCATCTGC GCTCCGGGCG TGCAGTTTGA AGGGCCGGTT
TTTGTCGGCG ACCTCACAGC TTCCGGATCG GCTTCGCCGA TGCTGGTGCT TGGCGCGGGC
GACGACGTGC GAATCACGGG TGGTGACTTG TGGCAGGCCA ACGGCAAGCC GGTTCAGGTG
AGCGGGATTG CCCAGCTGAA GTTCGTGGAC GGCACGACGT CGCACGGCGT GCTACTTTCG
GCCCAAAGAG ATCGCTCACG GCTGGAGGAG GATGGCGTCG ATGTGACCGC TCAGGTCGTC
GTCAATCCGG ATCACTAG
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| Protein sequence | MKLRLVYFLG AALSLLALHR AVAQQPIVSV SITAIQVGAG PWITDPNEKS GPFGTPLQIE
AAGVGTSMAS SFTYSFYVNG THIGTTTAPV PPPQRPVITW TPPQPGSYFL TVTIADGNNT
ATSLPVRYFA TGSVINSPVN GTLVPQGSSV VLKADATVTG GFIKQIQFYD NGEKIGEADA
TLPYSLIYTP PGVAGSSRSI TARAIDNTGT EQAASTPILL KIVEAITPRP TSAISSPLNG
SAVPVTIDNE DVVTVTIDAA STTGRISKVE LYIDGELFGT DNTYPYTFDW KPTVVGAYGL
VALTYDDKNN VIASRADDSG STTPPPTRVR VAAPPTVTII YPSNGGTIFE GITTQLKAAA
SDSNSVEGGI PVTITSVQFF DSGTFVGSAT TSADGSTYTV SFKPTRRMDE DGVPIPSSFT
AVATNSAGLS QSSKPVSVTV MQGGSPPPPP PDGIPPVITL TQPYSGQTIT VNTPVTFTAT
ASDADGTITS VQFVVNDTVL STDQVYPYSA TWTPTALGNY SITAVAADSK ANSVTTTPVI
VTVVDPSVSG PTVSIARPLA GTPLTANNPT TIQANATDDT AIASVQFYIN GKPLGPADTT
YPYSADWLPA SPGTYTVVAR AIDEVGNQTA SSPVTVSVTN GAAPIVTLDS PRGPTVVSAG
VAVSLAATAG DLDGTVTTVR FLANGISVGT VTAPPYIGSF RPTVAGYYSL QAEAVDNAGN
TTISSAVALS VLANQAPVPT VTAPANGATV RLGVATTLVA AATDADGIVA GVEFFVNGVS
VGSATQPPYK VQWTPTAEGV YRIAATASDN AGAVATSAPL LITASLTAAD TVAVGTYQGG
GEAGKFAFVA ATGAEANFIG YSTLASQPKT YFYTSVPMDI AGGFQLDNAG QPVLSGRLND
TGVSGTLDNG RVMFIGTDTS FFPSGHPVAA GYYAGRFTGR DASAVAAIVG EDGSITIRFA
DGAFQDAGGG TPGMIDSTGA FSFSTMSGNR VSGRIDPATG VFTGTLTGSS GGTFTASSSS
LQPASTTKIQ GMAREVKSDI SYGGRVYDQV LLEGASASIA ADPGQITRIS YADLSQDIVQ
VEFSGAGRLS ISLENATGPT TNTSYNQADV RYMKGHAGIV ITGADETTNV SVFTVGTITA
ANQSLFKSGV AYDGTADLAY LAIVSTSGRF GGVRTANANY VASSGFAGIC APGVQFEGPV
FVGDLTASGS ASPMLVLGAG DDVRITGGDL WQANGKPVQV SGIAQLKFVD GTTSHGVLLS
AQRDRSRLEE DGVDVTAQVV VNPDH
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