| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0488 |
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| Symbol | |
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| ID | 6208615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 574577 |
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| End bp | 576034 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690110 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001817378 |
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| Protein GI | 182412312 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.160649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA AACTCTGGAT CGTGTTCGCC GTCCTGCTGC TGGCGGGGCT CGGCGTCGGT
GGCTGGTGGT GGGTGCGCGC GGGCGCGGAG CAGGCGGTCG TCGCCACGGC ACTGCCCGCG
TTGCCCGATC TCACCAACGT TCTCGATCCG CTCCGCGAAC GCATCGCGTC GGCCGACGCG
CGAGCCACCT CCCGGTTCAG CGCGCGCACG GGTCTGGCGG AACTGAGCCG GCTCTATCAC
GCGAATGGTT TCCTCGAGGA AGCAATGCGC TGCTACGACG GACTCGAGCA GCTCGAGCCC
AACGAACCGC GCTGGCCGCA TTTGCACGCG ACGATCGTCG CCGGCTATGG GGAGGTCGAC
CGCGCGCTGA CGCTCTGGCG GCGGGTCGAG GCGCTCGCCC CCGATTACAT CCCCGCGCGA
CTGCGCATCG CCGACTGCGA GCTCAAGGCC GACCGGCCGA CGAAAGCCGC CGCGGAATAT
GCCGAGGTGC GGAAGATCCG GCCGGATGAT CGCTATGCGC TGCTGGGCCT TGCCCGGATC
GACTATGACG CTAGCCGTTG GGAGCAGGCG CGGGAAAAAC TCGAAGCGCT CGTCGCGCAG
ACGAATTTCG AACTGGGTTA TGATTTGATC GTCAGCGTTT ATGAAAAGCT CGGACAGCAC
GAGCGCGCCG AGTCGATTCG CGGCGCCGCG AAAGCCTTCG GCACGTATCG CGATCCGCCG
GACCCGTGGG TCGACGAGCT GATGGCGGAG TGCTACGATC CCTACCGGCT CTCGCTCACG
GCGGGCGTGC TCGCGCGCAG CGGCGGCCAG GACAAGGCGC TGCAGTTGCT CGAGCGGGCG
GTGGAGCTCG CGCCGGCGGA TATTTCCTCG CGGTTTCAGC TCGGCAACCT GCACGTCGAG
ATGGGCAATT TCTCGGCTGG CCGCGAAGCG CTGGAGACGT GCACGCGGCT CGCGCCGGAG
TTTTCTGACG GCTGGGCGCG ATTGAGCGCG CTGCAGGCAC AGCTCGGTGA AATGTCCGCG
GCCGAGCGCA CGCTCGCGAC CGGTCTGCAG AACTGCCCCC AGTCGCCGGC GCTACACTTG
ATGCGCGCGC GCAATCTCCG GCAGGCCGGT CGGACAGACG AGGCGATCAA CGAGTACATG
ATTTCCATCC GGCTGCGGCC GAACGAGCCC GAGCCCTATA TGGAGCTTGG CAACACGCTC
ATCGCCGCGG GGCGGGAGGA GGAAGGCGTC GAGCAAATCC GAGCCGCTCT GGTGGCCGAG
CCGGCGGACC CGATGGCGCT CAGCGTGCTG GCGTTTCGCG CGATCCAGCT CCGCGACGAG
GCAGAGGCGC AGCAATGGAT GACCCGCGTG GAGAATCAGC CCCGCGTGAA GCCCGAGCAG
CGCCAGCACC TGCGGGACCT CTATCGCCAG CAATTCGGCC ACGATTTTCC ATCAAGGGGT
CAGGCCGCTA ATCGTTAA
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| Protein sequence | MKTKLWIVFA VLLLAGLGVG GWWWVRAGAE QAVVATALPA LPDLTNVLDP LRERIASADA
RATSRFSART GLAELSRLYH ANGFLEEAMR CYDGLEQLEP NEPRWPHLHA TIVAGYGEVD
RALTLWRRVE ALAPDYIPAR LRIADCELKA DRPTKAAAEY AEVRKIRPDD RYALLGLARI
DYDASRWEQA REKLEALVAQ TNFELGYDLI VSVYEKLGQH ERAESIRGAA KAFGTYRDPP
DPWVDELMAE CYDPYRLSLT AGVLARSGGQ DKALQLLERA VELAPADISS RFQLGNLHVE
MGNFSAGREA LETCTRLAPE FSDGWARLSA LQAQLGEMSA AERTLATGLQ NCPQSPALHL
MRARNLRQAG RTDEAINEYM ISIRLRPNEP EPYMELGNTL IAAGREEEGV EQIRAALVAE
PADPMALSVL AFRAIQLRDE AEAQQWMTRV ENQPRVKPEQ RQHLRDLYRQ QFGHDFPSRG
QAANR
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