Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0465 |
Symbol | |
ID | 6208206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 549353 |
End bp | 550693 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690087 |
Product | hypothetical protein |
Protein accession | YP_001817355 |
Protein GI | 182412289 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.623088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCCG TCCTCCCGCC ACCGTTTCAC GCCACGCTGC GTGGGCGCTC TGTTGCGCTC TCGCGCGTCG CGCTGGCCGC GCTGGCGACG CAGCTGACGC TCCTCACCCT TCGCGCGGAG ACCGCTCCGG CCCCGAAGCC ACCCGCCGCC GCGCCCGCGC CGTTGCCAGC CAATCGCCGC GTGGCGGCCC CTACGCTGAC GGCCCGCGAA TCGCAGGGCT TGGTCAAACT CGGCGGCAAT CTTACGGAGC GCGGTGATTT CGACGCGGCC GAGATCGCCT ACCGCCAGGT CCTCGACGGC AAAGCGCCGC TCGAGACCAC GCAGGCCGCC CTGCTCGGGC TCGCGCACAT GCACCGCAAG CAAGGCGCGC TCACCAAAGC CGCCGCGATC TACGAGCGCT TCCTCAAGGA TTTTCCCAGC GACGATCGCG TGCCCGACGC GTTGCTCGAA CTCGGCCGCA CCTTGCGCGA CATGGGCGCA CCCCGGCTCG CGATCTCCCG GTTCTACAAC GTCATCAATT CGACGTTGAA GCTGCCCGCC AACCACGGCT TCGAGCACTA CCAGTTGCTC GCGAAAACGG CGCAGTTCGA AGTCGCCGAG ACGCACTTTC AGAACGGCGA TTACGCCGAA GCCAACAAGT TCTACTCGCG GCTGCGGATG CTCGACCTCG CGCCCGAGGA CCGTGCCCGT GCCCAGTTCA AATCCGCCTA CTCGCTCCAG CTCGCCGGTG ACAATGAAGG CGCCGCTAAC GGCCTGCGCT CGTTCATCGA ACAGTGGCCC GACGACGAAA ATGTCCCGCA AGCGCGCTAC CTGCTCGCTT CGAGTCTGCG CACGCTGAAC CGGCCGCAGG AGGCCCTCAC CGCCACGCTC GATCTGTTGC GCGCCGAGCG CAGCCGTTCG AGTGCCGACT CGAAGCGCTG GGCCTACTGG CAACGCCGCA CGGGCAATCA GCTCGCCAAT GGTTTCTTTC AAAACGGCGA CATCCTGAAC GCGCTGGCGA TCTACCATGG GCTGGCCGCG CTGAGCGACG ATCCGGTGTG GCGCATCCCG GTCACGTACC AGATCGCCCA GTGCTACGAG CGGCTCGGCG ATCTCGATCG CGCCACGAAA ACCTACCGCG TGATCGTCGA CACCTCGGTG GGCCAAACGT CCCCCGAAGT CACCGAGACC GCCCGGCTGG CTGGCGCCCG GTTGACGCAC GTCGACTGGC GGAGTGACAC GGATCGCCAA GTGGCCGCAC TTTTCGACTC GACCACCGGG CAGGCGCGGG ACGCTGATGT AAAGGCGCCC TTCCCCCATG ACCCCGATCG AAGCCCTTCG CCAACACCGC CAGCTCTGTG A
|
Protein sequence | MIPVLPPPFH ATLRGRSVAL SRVALAALAT QLTLLTLRAE TAPAPKPPAA APAPLPANRR VAAPTLTARE SQGLVKLGGN LTERGDFDAA EIAYRQVLDG KAPLETTQAA LLGLAHMHRK QGALTKAAAI YERFLKDFPS DDRVPDALLE LGRTLRDMGA PRLAISRFYN VINSTLKLPA NHGFEHYQLL AKTAQFEVAE THFQNGDYAE ANKFYSRLRM LDLAPEDRAR AQFKSAYSLQ LAGDNEGAAN GLRSFIEQWP DDENVPQARY LLASSLRTLN RPQEALTATL DLLRAERSRS SADSKRWAYW QRRTGNQLAN GFFQNGDILN ALAIYHGLAA LSDDPVWRIP VTYQIAQCYE RLGDLDRATK TYRVIVDTSV GQTSPEVTET ARLAGARLTH VDWRSDTDRQ VAALFDSTTG QARDADVKAP FPHDPDRSPS PTPPAL
|
| |