Gene Oter_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0390 
Symbol 
ID6208417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp470780 
End bp471664 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content64% 
IMG OID641690012 
Productflagellar hook-associated protein 3 
Protein accessionYP_001817280 
Protein GI182412214 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.133052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.988738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG CGAGTAACAC CGCCTCGGAG GTCATGCTGC GCCAGATCCA GCAGCTTTCG 
GCCAACCAAT CCAAACTCCA GCAGCAGGTC GGGAGCGGTC GTCGGATCAC CAATCCGGAA
GACGACCCCG CCGCCGTCGG CCGCGTGCTC ACGCTGCAGA GCGAGCAACG GCGACTCGCC
CAGTATGAGG CAAACGCCAA CCGCGCGCTC ACGCTGTCCC AAACCGCGTA CTCCGGGCTG
AAGGGGCTCA AGCAGATCTC CGACCGCGCC AACGAGCTGG CGACGCTGGG CACCGGCGCG
ATGAGCAGCG ACCAGATGAA CGCTTACGCC ATCGAGGTCT CCCAAATGGT CGAGCAGGCG
CTGCAGCATG CGAATAGCCA GTCGGGGAAC GACTACGTTT TCGCCGGCAC CGACGTCTCG
AACAAGCCGT TCGAAATCAA CACGACCACG GGGCTCGTCG AATACGGCGG CAACAGCGAC
GGCGCGCCCA TTCAGCTTTC GGAAGCCACC ACCGTCGTCG CCACGACCAG CGGCTCCACG
AACGAAGACA TCGCCGACAT GCTCAACGCG CTGATCTCGC TCCGCGATGC GCTGGCCAGC
GGGGATCCCG ACCAGGTGCG GGCCACGCAG CCGGCGCTGC AGGTCGGTGA AAACACCGTC
ATCGGCGCGA TGGCTGACGT GGGCGGCATC CAGACGCGCA TCGAAGCCGC CAAGTCGCAG
CAGGCCGACG GCGCGACGAA CCTCGAATCC CGCGTTTCCG ACGAATCCTC CCTCGATCTC
CCCACTGCCA TCGTGAAGTT GACCCAGCTC CAGACCGCTT ACGAAGCCGC GTTGGCCTCC
ACGACCAAGG TGATGAACCT CTCGCTCCTC GACTACATCC GTTAA
 
Protein sequence
MRIASNTASE VMLRQIQQLS ANQSKLQQQV GSGRRITNPE DDPAAVGRVL TLQSEQRRLA 
QYEANANRAL TLSQTAYSGL KGLKQISDRA NELATLGTGA MSSDQMNAYA IEVSQMVEQA
LQHANSQSGN DYVFAGTDVS NKPFEINTTT GLVEYGGNSD GAPIQLSEAT TVVATTSGST
NEDIADMLNA LISLRDALAS GDPDQVRATQ PALQVGENTV IGAMADVGGI QTRIEAAKSQ
QADGATNLES RVSDESSLDL PTAIVKLTQL QTAYEAALAS TTKVMNLSLL DYIR