| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0322 |
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| Symbol | |
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| ID | 6208254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 378844 |
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| End bp | 379905 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689944 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001817212 |
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| Protein GI | 182412146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0619651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGTCA TCGCGGGCGT GGCGATCGCG GCAGGGCTTG GCGCGCACGC GTGGTGGCCG
CGCACTGCCG CGGCGGATGC GACTGTGGAG ACCGTTCATG TCAGCCGCCG GGATGTGGGC
ACGGTCGTGA AGGCCACCGG CGTCATCAAA CCGCGCGTCG GCGCGGAGGT CCGGGTCGGC
TCGCGCACGT CGGGCGTTGT CAACCGGCTG CACGTGAGGG TGGGCGACGC AGTCAAGCCC
GGCGAATTGC TCGCCGAGAT CGACGACCGC GATCTCGCGG CGCGCCGGGA GCAGAGCGCG
GCCGAGCTGC AGCGTGCGCT GGCCGAGTTG CGCTTCGCCG AGAGCGAGTG GCAGCGCCGG
CGCGAGCTCG GCCGGTCCGG TGTCATTACG GCGAGCGAAC TCGATCTGGC GGAACGCGCC
GCGGTGGTCG CGGCGCAGCA GGTGGCGGTC GCGCGCGCGA ACCTGACGTA TGCGACGACG
CAGCTCGATT ACGCGCGGAT CACCGCGCCG ATCGGCGGTG TGGTGGCGTC CGTGGCGACG
CAGGAAGGCG AGACGGTCGC CGCCAGTTTC TCGGCGCCAA CATTCGTGAC GCTGATCGAC
CTCACGCGAC TCGAGGTCTG GGCCTATGTC GACGAGACCG ACATCGGACG GATCGAGCTC
GGCCAGCCGG CGCGGTTCAC CGTCGATACC TACGGCGAGG AGGAATTCGA GGGCGTTGTC
ACCGCCATCT ATCCCAAGGC CGAGATTCGG GACAACGTGG TGAACTACAT CACCGTCGTC
CGGTTCGAGC AGCCGCGCGA CCGCGTGCTC CGGCCCGAGA TGACCACGAC CGTCCGGATC
GCGATCGAGC TCCATGCGGC TGTGCCGAGC CTGCCGGCCG GTGCCGTGCG CTCGGAGAAT
GGCCGTGCTT ACGTGCTGGT GCGCGAGGGC GGGGCGGTCG CGCGGCGCTG GATCAGCGTG
GGGGCTCGCG ATCCTGCGGC GTGGGAAATC ACGAGCGGAC TGCGCGACGG CGACGAGGTG
CTCGTGGGCG ACATCCCTTT GAAAGGAGAA CCAGGATCAT GA
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| Protein sequence | MLVIAGVAIA AGLGAHAWWP RTAAADATVE TVHVSRRDVG TVVKATGVIK PRVGAEVRVG
SRTSGVVNRL HVRVGDAVKP GELLAEIDDR DLAARREQSA AELQRALAEL RFAESEWQRR
RELGRSGVIT ASELDLAERA AVVAAQQVAV ARANLTYATT QLDYARITAP IGGVVASVAT
QEGETVAASF SAPTFVTLID LTRLEVWAYV DETDIGRIEL GQPARFTVDT YGEEEFEGVV
TAIYPKAEIR DNVVNYITVV RFEQPRDRVL RPEMTTTVRI AIELHAAVPS LPAGAVRSEN
GRAYVLVREG GAVARRWISV GARDPAAWEI TSGLRDGDEV LVGDIPLKGE PGS
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