Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0321 |
Symbol | |
ID | 6208427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 378032 |
End bp | 378847 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689943 |
Product | ABC transporter related |
Protein accession | YP_001817211 |
Protein GI | 182412145 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0586621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAC TGACAGGAAT TCACCGCACC TACACCCGGC CGACGGGCGA GAGCGTCGCG GCTCTCGCGG ACTTTTCACT CCGCATCACC CGCGGCGAAC TCGTCGCGAT CATCGGCGCG TCGGGTTCGG GCAAATCGAC GCTGATGAAC ATCCTCGGAC TACTCGACCG GCCCGAGCGC GGGACTTACC GGTTCGACGG CCATGACGTG GCGGATCTCG ATGTGGCGGC GCAGGCGCGA TTCCGAAACC AGCACGTGGG GTTTGTGTTT CAGGCCTTTC ACCTGCTGCC GCGGACCACG GCGCTGGAGA ATGTCGAACT GCCGCTGCTC TATTCAGAGC GCGCGTCAAC CGACGGCCTG GCCCGGCGGG CGCTCGAGGC GGTTGGACTG GCGGACCGGA TCGAGCACAC GCCGTCGGAG CTGTCGGGCG GACAACAGCA GCGCGTCGCG ATCGCCCGCG CGCTGGTGAA CGAGCCCGAG TTGCTTCTCG CCGACGAGCC GACTGGCAAC CTCGATGCCG ATTCCGCCCG TGAGATCCTC GATCTTTTCG TGGCGCTGAA TCGCGCTGGC CGCACGATCG TGCTCGTCAC GCACGATCCC GCAACCGCGG CGCGGGCGCA GCGGGTGGTG CGCCTCGAGC GCGGCCGGCT GGCATCCGAC AGTGTCGCCC GGGTCGCCGA CCCCGGGTCG CTTTCAGCTG TAGGCCGGGT CGCTGACCCG GCACCGGCCT CAGCGAGGCC AGCGAGAACC AACCCACCCG CCTCACCACC GAAGCGGCCT ACAACCGAAC CGGCGGCGGA GGAGGAACAG CGATGA
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Protein sequence | MIELTGIHRT YTRPTGESVA ALADFSLRIT RGELVAIIGA SGSGKSTLMN ILGLLDRPER GTYRFDGHDV ADLDVAAQAR FRNQHVGFVF QAFHLLPRTT ALENVELPLL YSERASTDGL ARRALEAVGL ADRIEHTPSE LSGGQQQRVA IARALVNEPE LLLADEPTGN LDADSAREIL DLFVALNRAG RTIVLVTHDP ATAARAQRVV RLERGRLASD SVARVADPGS LSAVGRVADP APASARPART NPPASPPKRP TTEPAAEEEQ R
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