| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0304 |
|---|
| Symbol | |
|---|
| ID | 6207146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 343946 |
|---|
| End bp | 345322 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641689926 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001817194 |
|---|
| Protein GI | 182412128 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG3222] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGC GACTCATTCT TATGCTCAAA TTTCCGCGGC CCGGCACGGT GAAAACGCGG
CTGGTGCCGG CGCTGGGCGC GCACCGCGCC TGCGAGCTCT ACTGCTCGCT CGTCCGACAC
ACCCTCACCG AGGTTGAACG TTTCAAGGCC AGCGCTGAAG TCGCGGTCGA AGCGCGCCTC
ACGGACGCGC CGGATGAGGC CGCCGCTCGC GCTTGGCTCG GCGGTGACAT CGTGATTCGG
GACCAGGACG ACGGCGATCT CGGCCAGCGC ATGGATCGCG CCGTGCAGGT CGCCTTCGCG
GAAGGCGCCG AAACGGTCGC CGTGATCGGC GGAGATTGTC CGCAGCTTAC GGACCGTCAT
CTCGCGTCCG CATTCGCCGC CCTCGAACAG GCCGAAGCCG TCATCGGCCC GGCGGCCGAC
GGCGGTTACT ATCTGATCGG CCTCCGCCGG CCGCTGCCGA CGCTTTTCCG TGGCGTTTCC
TGGGGCGGCG CCGACGTGCT GGCCCAGACG CTCGCCAACG CCCGTGCGTT CGCAATCGAG
ATATCGCAGC TCGCGACTCT GCGCGACTTG GACGTGCCCG ACGATCTTCC GCTCTGGACG
CAAACTCCGG TCGCGCGCGC TGCAGGTCGT GGCGGCGTGT CGGTCGTCAT TCCGACGCTC
AACGAACAGG AGCAGCTACC CGCCACGCTC GCCGCGGCGC GCCGGGAACA TCCGCACGAG
ATCATCGTCA CGGACGGAGG CAGCACCGAC CGAACGCTTG AAATCGCGCG CCGTCATGAT
GCCCTCGTGC TCGAGGGGTC GGCAGGCCGG GCCCGCCAGA TGAATCGCGG GGCGGCCGTG
GCCACGGGCG AGTATCTGCT TTTCCTGCAC GCGGACACAG TGCTGCCCGC GATCTATCCG
TCGCTCGTGA AAACGACGCT CGCCCGACCG GGCGTCGTCG GAGGCGCTTT CAGGTTTGCC
GTCTCCGGTG AGTTTCTCGG CCGCCGACTG ATCGAGCGCG GTACAAACTG GCGCGCGCGC
TACCGGCAAC TGCCCTACGG CGACCAGGGA ATCTTCGTGC GCGCCGACAC TTTCGCGCAG
CTCGGCGGTT ATGCCGACTT GCCGATCATG GAGGACTACG AGTTCGTGCA GCGGCTACGC
CGATTCGGCC GGCTCGCACT CGCGCCTGCC GCGGCGCTGA CCTCCGGGCG CCGCTGGCGC
GAGCTTGGAC CGTTGCGCAC GCTGCTCGTC AATCAGCTCG TGATTCTGGG GTATTGCCTC
GGCGTGTCGC CGGTCAGGCT CGCCGACTGG TATCATCGGC CTCGGTCGTG GCGGACGTTC
CGACCCACGC GGCCAGGGAA TAAAGTCCCG GTTACGACGT CCCTCTTTCC AGAATGA
|
|---|
| Protein sequence | MRQRLILMLK FPRPGTVKTR LVPALGAHRA CELYCSLVRH TLTEVERFKA SAEVAVEARL
TDAPDEAAAR AWLGGDIVIR DQDDGDLGQR MDRAVQVAFA EGAETVAVIG GDCPQLTDRH
LASAFAALEQ AEAVIGPAAD GGYYLIGLRR PLPTLFRGVS WGGADVLAQT LANARAFAIE
ISQLATLRDL DVPDDLPLWT QTPVARAAGR GGVSVVIPTL NEQEQLPATL AAARREHPHE
IIVTDGGSTD RTLEIARRHD ALVLEGSAGR ARQMNRGAAV ATGEYLLFLH ADTVLPAIYP
SLVKTTLARP GVVGGAFRFA VSGEFLGRRL IERGTNWRAR YRQLPYGDQG IFVRADTFAQ
LGGYADLPIM EDYEFVQRLR RFGRLALAPA AALTSGRRWR ELGPLRTLLV NQLVILGYCL
GVSPVRLADW YHRPRSWRTF RPTRPGNKVP VTTSLFPE
|
|---|
| |