| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0106 |
|---|
| Symbol | |
|---|
| ID | 6208195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 131971 |
|---|
| End bp | 132711 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641689727 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001816997 |
|---|
| Protein GI | 182411931 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.387664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CCTTGGCCAT CATTCTCGTC TCGCTCCTCG CGCTGGTGCT CGTCGCCTAC
GTCATCGGCC AGTTTTTCCT CGGATCGATC GTGAAGACCG GCATCAACCG CGTCGGCCCG
CGGGTCACGC AGACGAAGGT CGAGCTGGCG GACGCCTCGA TCTCGCCTCT CTCCGGCGAA
GGCACGCTCG AGGGGTTCAC GATCGGCAAT CCGCAGGGTT GGAGCAGCGG CAATCTCCTT
TCGGTCGGCC GCGTCCAGTT CTCGGTCGAG CCCCGCTCGC TGTTGAATGA CACGATCGTG
ATCAACGAGC TCGTCGTCGA GCAGCCGGAG TTCGTCTACG AGACGCGCGT GGTCTCGAGC
AACATCGGCG ATCTGCTCAA AAACATCGAA GCCGCCGTGG GCCAGCGGCC GGAAACGGCT
GACGACCCGA ACGCGAAGCC GCGCAAATTC ATCGTGAAAC ATTTCCGCAT GGACAACGCC
AAGGTGGCGA TCGGCGTCGG TCCGGCCGCG TTGCCCTTGC CCGTGCCGGC GATGGAACTC
ACCGATCTCG GCGTCAAGGA AGGCGGGCTC ACCTCCGGGC AGCTGGCGGT GGCCGTTTTC
CGCGAGATCC TGCCGCAGAT CATCGCCGCC ACCACAGACG CCGCAGGCAA GATCGGCGGC
ACGATGGGCG CCGCCGCGAC CGAGTCGCTC AAGAAGGCCG GCGAAAATCT GCAGAAATTC
CTCGGCGGAG AGAAGAAGTA G
|
|---|
| Protein sequence | MKKTLAIILV SLLALVLVAY VIGQFFLGSI VKTGINRVGP RVTQTKVELA DASISPLSGE
GTLEGFTIGN PQGWSSGNLL SVGRVQFSVE PRSLLNDTIV INELVVEQPE FVYETRVVSS
NIGDLLKNIE AAVGQRPETA DDPNAKPRKF IVKHFRMDNA KVAIGVGPAA LPLPVPAMEL
TDLGVKEGGL TSGQLAVAVF REILPQIIAA TTDAAGKIGG TMGAAATESL KKAGENLQKF
LGGEKK
|
|---|
| |