Gene Oter_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0092 
Symbol 
ID6207526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp111568 
End bp115509 
Gene Length3942 bp 
Protein Length1313 aa 
Translation table11 
GC content67% 
IMG OID641689713 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001816983 
Protein GI182411917 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.783031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTC TGCCCACATT ACCCCGCAGA ACCTGGCTGG AGCGATCGTC CCTCCTGATT 
GCGAGCTTGC TGCTCGTGAT CGGGGTATCG ACGTTGGTGG GCACGTGGGC GGGGGTGGAG
GCCTTCGTGC AGCCGTCGCC TCAGGCCGCT TCCATCAAAG CGAACGAAGC GCTGTGTTTC
ACCCTCCTCG GGCTGGTGCT GCTGGCGATC GAGCTGGGCC GGCCGATGGC CAGCTGGGCG
GCCGTGATTC CCGCAGCGAT CGCCGCGCTG TCGCTCGCCG AGCACGCGCT GCGAATCAAC
CTCGGCCTGG ATGAACTGTT CGGCACCGAC CGGTGGCTGG TCGATACCGC ACATCCCGGA
CGGATGTCGG CGATGTCCGC GTGCAGCATC CTGCTCGTCT CGCTGGCGCT GACGTGGCGC
AGCCTGCGGC GCGGCACCCC CGCGCGACTT TTCACGGAGG CGGTGATCAG CTCGCTCGTT
GCCTCTGGCG GTTTTTCCAC ATTGCTCGGT TACGCCGTCA GCCTGCCGGC GGTTTACCGC
TGGGGCACCC ACACCGCCAC TTCGCCGCTC GCCGCCGCCG CTCTCCTGGT GCTGGGCGTC
GGCCTGCTCA TCCTGGCTTG GCGGGAAACG ATGAACGCCG GCGGCGGTCC GCCCGCGTGG
TCGCCGATGC CCGCGATCGT CGGCTGCCTC ACGTTCACGC TGATCCTTTG GATCGGGTTG
CGCGAACGCG AAACCGTCTA CCTCGGCGCG AAGACGCAGA CGGAGATGGA TTCGCTGGCG
ACGAGTTTCA AATACGAGTT CGACCGGCAG GCCGCCGCCA TCGAGCGACT CGCCCGCATG
TGGGCGGATG GCGCGCTGAC CGCCGAAGCC GTGTGGGAGG TCGACGCGGG CTCCCAATGG
CAGGATTCGT CGGGCCGGCT CGGGATCCTG TCGATCGCGG TGCTCAATCC CGAGCTGCGC
ACGATCTGGG TTTATCCGCG CGAGGAGAAC GCCACGGCGA TTTCGCTGGA TCATGCGATG
GATCCGGTGC GGCAGGCGGC GATCGCCGCC GCGCGCATCA ATCGCGGCCC GGTCATCTCC
GGCACGACGG AACTCGGCGG CCGGGGCCAC GGCGTGGTCA TCTATGCCCC GATCATCCGG
CAGGGTGTGG CGAGCGGGTA CGTCGCCGCC GAGTTCCTCT ACCGCACCTT TTTCAGCAGC
GTCATCGCCG AACGGAAAAT CGAGGACGGG CACCTCGTCG AGGTGAAGAT CGGCGCGGAG
GAGGCGTATC GCACCGTGCT GCAGCCGAAG GAGCAACGCC ACGATGCGCT GCTCATCGAC
AAGACCTACC CGATGTTCGA CCGCCGCGTC CGCGTGACGA TGACGCCGCG CACTGAGGCG
CTCCAAAACG ACCGGCGCTA TCTCCCCGAG CTGGCGCTCG GCGCGGGCAT CGGCATCGCA
CTGCTGCTGG GCCTGAGCGT GCACCTCGCG CGGGGCGCAC GCGCCGGACA ACATGCGGCC
GAGCTTTCGA ACAAGAAGCT CCACGCCGAA AACGAGGAAC GCCGCCGCAT CGAGGCGCGG
CTGAAGGTTT CGGACGAGCG CCTGCGGCTC GCGCTCGACT CGACGCAGAT CGGCATTTTC
GAGTGGAACG TCGCCGCCGG CCACGTCTAC TACAGCTCCG GACTCTGGGC GATGCTGGGC
TACGAGCACA GCCGGATGTC GGCGACCGTC GCCGCCTGGC AGTCGCTGAT TCACCCCGAC
GATCTGCCCA CCTATCGCCG CCGCGTCGAC TCGCAGCTCA ACGGCGTGGC GTCGTTCATT
GAACCGGAAT TCCGCGTCAA ATCCCACGGG GGTGAGTGGC GCTGGGTTTA CACCCGCTCC
AAGACCGTGG CGGCCAGCAC CAGCGGCCGC CCGACCCGGA TCATCGGCAC CGTCCAAGAC
ATCACCGCCC GCCGCGAAGC GGAACAGGCG CTGCGCGAAA GCCAGGCCGA GACCCGCAAG
CTCTCGCTCG TCGCCGCCAA GACTGACAAC CCGGTACTCA TCATCTCGCC CGCCGGCTCG
ATCGAGTGGG TCAACGAAAG CTTCAGCCGG GTCATGGAGT ATTCGCTCGA CGAGGTCGTC
GGCCGATCCC CCATCGACTT CGTCGCCGCC GCTGAGACCG ACGCCCGCAC GCTGCAGGAA
ATCGACGCCG CGATCGCGCA GGGCCGCGCC CACTCCGGCG ACGTGGTGAC CCACTCCAAG
CGCGGCCGCA AATACCACCT GCGCGTCGAG CTCCAGCCGG TGCGCAACGA CGCCGGGCAG
CTGCAGAACT TCATCGTCAT CGAGACCGAC ATCACCGCGC GGGTCGACAC GGAGCTGGCG
CTGCGCCGGG CGAAGACCGA AGCCGACGAG GCGTCGCGCG CGAAGAGCGA CTTCCTCGCC
TCGATGTCGC ACGAGATCCG CACCCCGATG AACGGCGTGA TCGGCATGAC CAGCCTCCTC
ATGGAGACGG ATCTCAGCCC GGAGCAGCGG GACTTCGTCA ACACGATCCG CACCTCCGGC
GAAGCGCTGC TCACGATCAT CAACGACATC CTCGACTTCT CCAAGATTGA GTCGGGCAAG
ATGGATCTCG AGCACCTGCC GTTCGAGCTG GCGACCTGCC TCGAGGAATC GCTCGACCTG
TTCGCGTTAC AGGCCTCCGC CAAGCATCTC GAGCTCGCTT ACCACATCGC GCCAGACGTG
CCGGAATGGA TCATCGGCGA CATCACCCGG CTCCGGCAGA TCGTGGTGAA CCTGGTAAAC
AACGCGGTGA AGTTCACGTC CGCCGGCAGC ATCGCGATCG AGGTCCGGCG GCGGCCGCCC
ACCGTTCCCG CCAACCTGAA ACGCTTTCCC CTGGAGTTCG TGGTGCGCGA CACCGGTATC
GGCATTCCCG CGGAGCGACT CGATCGGCTC TTCAAGGCGT TCAGCCAGGT CGATTCGTCG
ACGACGCGCA AATACGGCGG CACCGGTCTC GGCCTGGCGA TCTGCCAGCG CCTGAGCATC
CTGATGGGCG GCGGCATTCG TGTGGAGAGC AAGGTCGGCG AGGGTTCGTC GTTCATCTTT
ACGATCACGA CCGAAGAGGC CGCCGCAGGC GCGCCACTCG TGGCTCCGCC CGACCTGGAC
CAACTCAAGG GCTGCCCCGT GCTGTGCGTC GAGGATCATC CGGTCGTGCA GCGACGGATC
GCGGGCCTGC TGGAACCGTA CGGCGCCACG TGTCACTTCG CCGCCAATGC CTTCGCGGGC
GCCGCGCTGG CCGCCACGCT GCCTACGCCA CCCGCGCTGG TCATCATCGA TGGCGACGAG
ACCGAAGGTA GTTCGCCGCT GGAAGCCCTG CAGTCCATCA AGGCGCCGCG GCTGCTGATG
CTCCCGTTTG GCCAGACCGC GCCGCCTCCG CCCGCCGACC GGCAGCCGTT CACCAGCATT
TTCAAGCCTT TCAAAACGAC CTCGTTCCTG CACGTGGTGA GCGCCCTGCT CAACCCCGCG
ACGCATACCG TCATCGCGAC CGACACCACC GGACCGTTCA CGCGGCGACT CGCGGAGGAG
TTTCCACTCG ATATCCTGCT GGCCGAGGAC AACACCGTGA ACCAGAAGGT CGCGCTGCGG
TTCCTCGAGC GGCTCGGCTA TCGCGCCGAC GCCGTCAGCA ATGGCCAGGA AGCCGTGACC
ACGCTGGCCG CGCGGCACTA TCATCTCGTC CTGATGGACC TGCAGATGCC CGAGATGGAC
GGGCTGGAGG CCAGCCGGCA GATCCGAAAA AAGGTGCCCG CCTCGCGGCA ACCGAAGATC
GTCGCGCTCA CCGCGAACGC GATGCAGGGC GACCGCGAGC GCTGCCTCGA AGCGGGCATG
GACGATTATA TTTCGAAGCC GGTGAAGCTC CACGAAATCG AGGCGGCGAT CCGGCGGCTC
TTCGCTTCGC GCGAGGCCAA CACGCCGCAG ACCATCGGGT GA
 
Protein sequence
MPFLPTLPRR TWLERSSLLI ASLLLVIGVS TLVGTWAGVE AFVQPSPQAA SIKANEALCF 
TLLGLVLLAI ELGRPMASWA AVIPAAIAAL SLAEHALRIN LGLDELFGTD RWLVDTAHPG
RMSAMSACSI LLVSLALTWR SLRRGTPARL FTEAVISSLV ASGGFSTLLG YAVSLPAVYR
WGTHTATSPL AAAALLVLGV GLLILAWRET MNAGGGPPAW SPMPAIVGCL TFTLILWIGL
RERETVYLGA KTQTEMDSLA TSFKYEFDRQ AAAIERLARM WADGALTAEA VWEVDAGSQW
QDSSGRLGIL SIAVLNPELR TIWVYPREEN ATAISLDHAM DPVRQAAIAA ARINRGPVIS
GTTELGGRGH GVVIYAPIIR QGVASGYVAA EFLYRTFFSS VIAERKIEDG HLVEVKIGAE
EAYRTVLQPK EQRHDALLID KTYPMFDRRV RVTMTPRTEA LQNDRRYLPE LALGAGIGIA
LLLGLSVHLA RGARAGQHAA ELSNKKLHAE NEERRRIEAR LKVSDERLRL ALDSTQIGIF
EWNVAAGHVY YSSGLWAMLG YEHSRMSATV AAWQSLIHPD DLPTYRRRVD SQLNGVASFI
EPEFRVKSHG GEWRWVYTRS KTVAASTSGR PTRIIGTVQD ITARREAEQA LRESQAETRK
LSLVAAKTDN PVLIISPAGS IEWVNESFSR VMEYSLDEVV GRSPIDFVAA AETDARTLQE
IDAAIAQGRA HSGDVVTHSK RGRKYHLRVE LQPVRNDAGQ LQNFIVIETD ITARVDTELA
LRRAKTEADE ASRAKSDFLA SMSHEIRTPM NGVIGMTSLL METDLSPEQR DFVNTIRTSG
EALLTIINDI LDFSKIESGK MDLEHLPFEL ATCLEESLDL FALQASAKHL ELAYHIAPDV
PEWIIGDITR LRQIVVNLVN NAVKFTSAGS IAIEVRRRPP TVPANLKRFP LEFVVRDTGI
GIPAERLDRL FKAFSQVDSS TTRKYGGTGL GLAICQRLSI LMGGGIRVES KVGEGSSFIF
TITTEEAAAG APLVAPPDLD QLKGCPVLCV EDHPVVQRRI AGLLEPYGAT CHFAANAFAG
AALAATLPTP PALVIIDGDE TEGSSPLEAL QSIKAPRLLM LPFGQTAPPP PADRQPFTSI
FKPFKTTSFL HVVSALLNPA THTVIATDTT GPFTRRLAEE FPLDILLAED NTVNQKVALR
FLERLGYRAD AVSNGQEAVT TLAARHYHLV LMDLQMPEMD GLEASRQIRK KVPASRQPKI
VALTANAMQG DRERCLEAGM DDYISKPVKL HEIEAAIRRL FASREANTPQ TIG