| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0038 |
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| Symbol | |
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| ID | 6205003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 47264 |
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| End bp | 50395 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689659 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001816929 |
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| Protein GI | 182411863 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.11404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGG CGGTGTATTG CCGCACGACG ACCGTTTTCG GCCTCCAGTA TGATGCTCCG
TTCGCGCTGC TCCTGCCGGT CACGTTTGTG AGCGCGTGGT TCGGGGGCGC GCGGGCGGGC
CTACTCGCCA CCGTGGGCGG CGCCCTGGTC GGCGTCTACG CCGGCTCGTC CACGACCGGC
CTGGACTCTG CCATCGTCTC CCGCCTGTTG CTGTTCGTGG CCAACGGCGG GATCATCACC
GGCCTGTGCG TCGCGCTGCA TTCGGCGCTG CGACGGTCGC GCGTCGCCCG CGACGAAGCC
GCGCGCAATT TCGAAATCAT GGCGAACAAC GCGCCGGTGC TGATCTGGTC CACGGGCGCG
GACGGTTGCT GCGCGTTCGT GAACCGCAAT TGGGTCACGT TCACCGGCCG CGCGAGTGAA
CCGCATGGCC GGCGCCCCGG CCAATTGCAC CCCGCCGACG CGGCGCGTTA TCACGCCGTT
TCGACCGAGG CGATGGCCGC CCGCAAGCCC TTCCGCATCG AATACCGGCT GCGCCGCGCC
GACGACACCT ACCGCTGGTT ACACGAGTAC GCCGTGCCCC GCTTCGACCA GGACGGCGAG
TTCGAAGGCT ACATCGGCTC CTGCAACGAC GTCACCGATT CGCGCCACGA GCGCGAGGAA
CTCGCCTTCA TCGCGCGGCT GCAGGCGGCG CTCACCGAAT CGCTCGATCT CGACAAGTGC
GCCGACGTGC TCGGGCAGGC GTTCGTCCCG CGGATCGCGG ACTGGTGTTC CATTCATCTC
GTCAACGACG CGGGGAAGCT CGAACTCGTG CGGCTGCAGC GCAACGACCG CGTTCCCGCC
GGCGGCGTGC CGCGGCCCGC CGCGGCCCCG GACAGCCTGG AGCAGCGCGT CGTGCGCGAA
GGTGCACTCG TGCAGCTCAC CGGCCCGGAC GAAGCGCTGC TCCGCACGCT CGCGGCCGAC
GAAGCCCAGC TCGAGCGACT GCGCGCCACG CCGGACATCA CCTACGCCGG CGTACCGCTG
CGTGCGCGCG GGGCGATCAT CGGCGTGCTG GCGCTCGCCA CGCTCGCCTC GGGGCGGCGG
CTCGGCGCCG AGGAATGCGA ACTCGTGCGC AAGATCGCCG GGATCGCCGG CCTCGCCCTC
GACAATGCCC GGCTCTATCG CAGCGCCTGT CAGGCCGCCG CCGCCGAGGC CCAGGCGTTG
CGCGAAGTGG AGCGCAGTGA GCAGCGATTC CGGTTCATCT GGGAGGCCAA TGTGTTTGGC
ATCGGCACGG TCGCTCGCTC CGGGCAGATC CTGACCGCCA ACGGCACGCT GGCCCAACTC
CTCGGTTACA CGCAGGACGA CGTCGCGGCC GGCCGCGCCA GCATGAACGA GCGCACCGCC
CCCGGCTGGC ACTTCGTCGA CATGCACACT GGCGAGGAAC TGGTCCGCAC CGGCCGTTGC
GCTCCCTACG AAAAGGAATA CGTCCGGCCC GATGGCGCGC GCGTGCAGGC ACTCGTCTGT
GGCATGGTCC TGCCGCAAAC CGACGAGTCG CTCGTGTTCG TGCTCGACCT CACCGCGCAG
AAGCACGCCG AGCGCGCCCT CGACCGCCAA AGCCTGCTGC TCAAGACCAT CATCGATGCG
ATGCCCGCGA TGGTCGGCTA TCTCGGACTC GACGAACGCT TCCAGCTGCA CAACGAGAAA
TATGCGAAAT GGCTCGGGGT GGACGGTTTC GCCATCCAGG GACGGACGAT GCGCGAGCTC
GTCGGCGACG AGGCCTACCC GCGCATCGCG CCTTACCTCC GCGCCGCGTT CCGCGGCCGG
AACATGCGGC ACGAAACCAC CCTGCGCACT GGCGACCGGG AGCGTCACCT CATCGCAAGC
TACCGGCCCG ACCGCGACGC CGACGGGCGC GTGTGCGGAG TGGTGATCCA CGCGTACGAC
ATCACGGAGC GAAAGGAGAC CGAGCAGGCG CTCGCCGAGG CTCTCACCCG CTATCGCTTC
CTCGCTGACG CCATGCCGCA GATGGTGTGG ACGGCGCTGC CGGACGGACA ACCCGACTAC
GTCAACCGCC GCTGGCTGGA AACGACCGGC ATGACCGAGG CGGCGTCGCT CGCGCGCGAC
GGCTGGCTCG AGGCGGTACA TTTCGAGGAT CGCGCGATCA CGCGCGAACT CTGGCATCGC
GCAGTCGCGC AGTGTGTCCC GTTCGAGCAC GAGTGCCGGC TGCGCTGCGG CAAAAATCCC
ACCTGGCGCT GGCATCTCGT GCGCGCGCTG CCCCGCCGCG ACGATCACCT GGCCGTCGTC
CAGTGGGTCG GCAGCGCCAC CGACATGGAC GAGCAGCGCC GGGCCTATGC CGAACTCGAC
GAAGCCCGCG CGCGCCTCAA GTCCCACGCC GAGGAACTCG AGGCACGCGT CCGGATGCGC
ACGGCGACAC TGCGGGAAGC GAACGCCGAA CTCGAGGCGT TCACCTATTC TGTCTCCCAC
GACTTGCGCA CGCCACTGCA GTTCGTCCGC GGTTTCGCGG AGGCGATCCG CACCGATGCC
GGCGCCACGC TTTCGGCCGA AAACCGCGAC TACCTCCAGC GCATCATCCG CGCGGCGACG
CGGATGGATA CGATCATCCA GGACCTTCTT TCCTACAGTC GGCTCGCCCG CACGGATCTG
CAACTGGCGG AACTGCCGCT CGACGACGTG ATCTCCGACG TGCTCGCCAA CCAGCACGCG
ATGATTCGCC AAACGTCGGC GCGGGTGTCC GTCGACAGCC CCTTGCCCAC CGTGCGCGCG
GATCGCACCG GCCTCTTTCA GGCGATCTCC AATTTGGTTT CCAACGCGCT GAAATTCACC
CGCGCCGGGC AGCCGCCAGT CGTGCGCATC CGCGCCGAGG TGTCGGAGCG TGGCGTGCGG
CTCTGGGTCG AGGACGAAGG CATCGGCATC GACCCGCGGC ATCACGAACG AATCTTTGGG
CTTTTCGAAC GGTTGCACAG CCCCGGCGAA TACCCGGGCA CCGGCATCGG GTTGTCGCTC
GTACGCAAAG CGGTCAGCCG CATGGGCGGC AGCTGCGGGC TCGAGTCGGT CCCGGACGCC
GGCAGTCGCT TCTGGATTGA ATTCCCCGCG GTGAACGCCG TGTTGCCCGC TGTCGCGCAT
GCTACCGCTT GA
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| Protein sequence | MGAAVYCRTT TVFGLQYDAP FALLLPVTFV SAWFGGARAG LLATVGGALV GVYAGSSTTG
LDSAIVSRLL LFVANGGIIT GLCVALHSAL RRSRVARDEA ARNFEIMANN APVLIWSTGA
DGCCAFVNRN WVTFTGRASE PHGRRPGQLH PADAARYHAV STEAMAARKP FRIEYRLRRA
DDTYRWLHEY AVPRFDQDGE FEGYIGSCND VTDSRHEREE LAFIARLQAA LTESLDLDKC
ADVLGQAFVP RIADWCSIHL VNDAGKLELV RLQRNDRVPA GGVPRPAAAP DSLEQRVVRE
GALVQLTGPD EALLRTLAAD EAQLERLRAT PDITYAGVPL RARGAIIGVL ALATLASGRR
LGAEECELVR KIAGIAGLAL DNARLYRSAC QAAAAEAQAL REVERSEQRF RFIWEANVFG
IGTVARSGQI LTANGTLAQL LGYTQDDVAA GRASMNERTA PGWHFVDMHT GEELVRTGRC
APYEKEYVRP DGARVQALVC GMVLPQTDES LVFVLDLTAQ KHAERALDRQ SLLLKTIIDA
MPAMVGYLGL DERFQLHNEK YAKWLGVDGF AIQGRTMREL VGDEAYPRIA PYLRAAFRGR
NMRHETTLRT GDRERHLIAS YRPDRDADGR VCGVVIHAYD ITERKETEQA LAEALTRYRF
LADAMPQMVW TALPDGQPDY VNRRWLETTG MTEAASLARD GWLEAVHFED RAITRELWHR
AVAQCVPFEH ECRLRCGKNP TWRWHLVRAL PRRDDHLAVV QWVGSATDMD EQRRAYAELD
EARARLKSHA EELEARVRMR TATLREANAE LEAFTYSVSH DLRTPLQFVR GFAEAIRTDA
GATLSAENRD YLQRIIRAAT RMDTIIQDLL SYSRLARTDL QLAELPLDDV ISDVLANQHA
MIRQTSARVS VDSPLPTVRA DRTGLFQAIS NLVSNALKFT RAGQPPVVRI RAEVSERGVR
LWVEDEGIGI DPRHHERIFG LFERLHSPGE YPGTGIGLSL VRKAVSRMGG SCGLESVPDA
GSRFWIEFPA VNAVLPAVAH ATA
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