| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0033 |
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| Symbol | |
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| ID | 6205476 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 43880 |
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| End bp | 44472 |
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| Gene Length | 593 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 63% |
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| IMG OID | 642486356 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00363799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAACAGA CCCTGGCCAA CAAACGCGTG GCGATCCTCG TCACGGACGG ATTCGAACAA
AGCGAGCTGG AGCAGCCGCG TGCCGCGCTC GAGGATGCGG GTGCGTCGAC CACGCTGATT
TCACCGAAGA AAGACACGGT GCGCGCGTGG AACGAGGACG ACTTCGGCGA CACGTTCAAC
GTCGACCAGA CGCTGCAACG GGCAAACGCC GAGGAGTTCG ATGCGTTGCT CCTGCCCGGC
GGCGTGATGA ATCCGGACCA TCTCCGGATG GAACCGGACG CGGTGCGGTT CGTGGAACAT
TTTTTCCAGG CGGGAAAACC CGTCGCGGCG ATCTGCCACG GTCCGCAGCT GCTGATCGAG
GCGGACGTGT GCGCGGACGA CGCCTGACCT CGTATCCCTC GCTCAAAACG GATCTGCGGA
ATGCCGGAGC GGACTGGGTG GATGAACCGG TGGTGACCGA TCAGGGGCTC GTGACGAGCC
GCCGGCCGGC CGACATCCCG CAATTCAACG AGAAGATGGT CGAGGAATTC TGCGAAGGCC
GGCACGAAGG CCAGCGACGT TCAGTCGACA CGCCGCTTTC TGCTCATCGC TGA
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| Protein sequence | |
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