Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_4224 |
Symbol | |
ID | 5381322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 1648125 |
End bp | 1648907 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640836912 |
Product | regulatory protein LuxR |
Protein accession | YP_001372753 |
Protein GI | 153011539 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.525332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCG ATCTCATTCA TTTTCCGAAT TTCAAAAAGA CCTTCTTTGG AACGGCCTTC CAAAGCGACA CCCTTGCTCT CCTGACGCGA ATTCGCGATG AGATCGGTTG CCGCCACATC ATGCATACCT ATCGCGGGCG CATGGGTGAC TGCACGAAAA CCACTTCTTC CGATCTGACA GTCGTGATGA CCGTGCCGAC CTCCTGGACT GCGCGTTATT CCACCAAGAA TTATTTCGTC ATCGATCCGA TCTTTCAGGA AGACGCGCCT TATTTCCAGA ATGATGCCAG CGGTATAGTT CGCGATCTTC AGGAAGATGC CAATGAGTGC CCGTCCATTG CTGAACTGCT GCAGGATGCG GAAAAGCACG GACTGGGCAA CATCTTCGTC GCCGTGTCAG CCCGGAGCCA GAAAGGTGCT GTGGGATGCA CCTTGTTCAT GTTCGAGATG AGCCCCGACG AGGATCGCGA GCAATTTGTG GCCAAGCTTC GCCCGCGCCT GCTGAGCCTG TCCGGGATCA TTCATTCAGC CCTGTGCGGC TGCAAGGATG TTGCGACGGT CGCAAGCCTT CTCACCCCGC GTGAAGTCGA TTGCCTGCGT TGGGCCGCGA ACGGCAAGAC GGATGGAGAG ATTGCGGAAA TCCTGAGTAT CGCGCGCTGG ACCGTCGTTA CCTATCTCCA GAATGCGAAG ATCAAACTCA ACTGTTCCAA CCGCACGTCG GCTGTCGCGA CGGCGCTGTC GCTCGGCATC ATCGAAATGC CGGAAGTTCA CCATCTGGTG TAG
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Protein sequence | MTLDLIHFPN FKKTFFGTAF QSDTLALLTR IRDEIGCRHI MHTYRGRMGD CTKTTSSDLT VVMTVPTSWT ARYSTKNYFV IDPIFQEDAP YFQNDASGIV RDLQEDANEC PSIAELLQDA EKHGLGNIFV AVSARSQKGA VGCTLFMFEM SPDEDREQFV AKLRPRLLSL SGIIHSALCG CKDVATVASL LTPREVDCLR WAANGKTDGE IAEILSIARW TVVTYLQNAK IKLNCSNRTS AVATALSLGI IEMPEVHHLV
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