| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4200 |
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| Symbol | fliF |
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| ID | 5382383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | - |
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| Start bp | 1628985 |
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| End bp | 1630724 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640836888 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001372729 |
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| Protein GI | 153011515 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGA ATTTCCAGCA ATTGATCGAA CAGCTCAAGG GTACGCTCGG CAAGCTCGGC
GCGCGAAAAC TCATCGCGCT CGGACTGGTG GGCGCGGCAC TCATGGGCGC GATCCTCTAT
ACGAGCATCT ATCTGAGCCG CCCATCCTAC GAGACGCTCT ATGTCGGCCT TTCGCGTGAC
GACGTGAACC GCATGGGCCT TGCGCTCGGT GAAGCAGGCA TTCCTTTCGA CGTGAAGGCT
GACGGCTCGT CCATCCTCGT GCCCATCGGC AAGGCTGAAA ATGCCCGCAT GTATCTGGCT
GAAAAGGGCC TGCCGACCTC GAACAATGCC GGTTACGAGC TGTTCGACAA TATGGGTTCG
CTCGGCCTCA CATCGTTCAT GCAGGAAATC ACCCGCGTTC GTGCGCTTGA AGGCGAAATC
GCCCGCACCA TCCAGGCCAT TCGTGGTGTG AAAGCCGCGC GCGTTCACAT AGTCATGGCA
GAAAAAGGCT CGTTCCGTCG TGGCGACCAG AAGCCGTCCG CCTCGGTCGT CATCCGCGCC
GAAGGCGGCT TTGCTGCCGA ATCTGCACAG TCCATCCGCC AGCTGGTCGC TGCCGCCGTT
CCATCGCTCG ATGCTTCCGC CGTCACTGTT CTTGACACCA ACGGTCGTCT GCTGGCATCG
GCTGGCGAAG CTGCCAATGG CGCAGCCCTC ATGACCGCCT CGCTGGAACA GCAGGTTGCA
GGCAATGTAG ACGACAGCAT CCGCAAGGCG CTTGCGCCCT ATCTCGGCAT TGGCCATTTC
CAGACGAGCG TTCAAGCCGT GCTCGATACG GACCGCCGCC AGATCAACGA GACGACCTAC
GATCCTGAAT CCCGCGTCGA GCGTTCCGTA CGTGTTGTCC GTGAAAGCGG CGATTCCCGC
AACAATCGTA ACGACAATGC AACCGGTGTG GAACAGAACA TTCCGCAGGA AGAAATCCAG
AACCGCAACG GCGAAAGCTC GACGGAAAAG ACCGACCGCC GCGAGGAACT GACCAATTAC
GAAATGAACA GCAAGACTGT CTCCACCGTC AGCGATGGTT ATACCGTCAA GCGGCTGTCC
ATTGCCGTGG TCATCGATCA GGCGCGCCTT CTGGAAACTG CGGGTACCAC ACCGCCGCCT
GCCAATTTCG TCGATCAGCA GATCACCAAG ATCCGCGACC TCGTTGCAAC GGCTGCCGGT
CTCAATGCGG ATCGCGGTGA CGTCATTAAT GTGACGGCGG TGAACTTCCT CGACCCTGCC
GGTGCCGATA TGGAGCCGGT CTCCACGCCG TGGACCGATA CTGTGCTTCG CCAGAGCGGC
TCTTATGTCA ATGCGCTTGC AATCCTTGCC GCCGTTGGTC TCCTGATCTG GTTCGGTCTG
CGTCCGCTGC TGCGTGACCA GAATGCCAAG CCAACCGGCA CGGAAGTGGC CGTCCGCGAG
ACGAGTGAAG TGGCAATGCC GAATTTCGTC GGCGGTCAGG CGGCTGGTGA AGGCGTGCAG
GCTGTCATCG GTGGGCCGGA GGCCTATGCC GATCAGATGA AGACCAGCCT CAGCGATCTT
CGCCAGCGCA TGCGCATGCC TGCCAAGCTA CGTCTGGAGC AGATGATCGA CATGGATGAG
GAGCGCGTCG CCTCCATTCT CAAGCAGTGG ATTCACGAAA CCGCCGCGAG CCGCGAAGCC
CAACCATTGA GGGAATCGGC CGTAAAGGCT TCGGCCATGC CGGAGCTTGA GGCGGCCTGA
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| Protein sequence | MQQNFQQLIE QLKGTLGKLG ARKLIALGLV GAALMGAILY TSIYLSRPSY ETLYVGLSRD
DVNRMGLALG EAGIPFDVKA DGSSILVPIG KAENARMYLA EKGLPTSNNA GYELFDNMGS
LGLTSFMQEI TRVRALEGEI ARTIQAIRGV KAARVHIVMA EKGSFRRGDQ KPSASVVIRA
EGGFAAESAQ SIRQLVAAAV PSLDASAVTV LDTNGRLLAS AGEAANGAAL MTASLEQQVA
GNVDDSIRKA LAPYLGIGHF QTSVQAVLDT DRRQINETTY DPESRVERSV RVVRESGDSR
NNRNDNATGV EQNIPQEEIQ NRNGESSTEK TDRREELTNY EMNSKTVSTV SDGYTVKRLS
IAVVIDQARL LETAGTTPPP ANFVDQQITK IRDLVATAAG LNADRGDVIN VTAVNFLDPA
GADMEPVSTP WTDTVLRQSG SYVNALAILA AVGLLIWFGL RPLLRDQNAK PTGTEVAVRE
TSEVAMPNFV GGQAAGEGVQ AVIGGPEAYA DQMKTSLSDL RQRMRMPAKL RLEQMIDMDE
ERVASILKQW IHETAASREA QPLRESAVKA SAMPELEAA
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