Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3985 |
Symbol | |
ID | 5381864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 1402770 |
End bp | 1403699 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640836671 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001372519 |
Protein GI | 153011305 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.927728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGGCC CGGCCATGGC TGATCTCAAC GATATGCGGT TTTATGTGGA AGTCGTGGAG CAAGGCGGCT TTTCCGCTGC CTCCCGAAAA CTGGATATGC CGCGCTCCAG GCTGAGCCGC CGGATCGCCC TGCTGGAAGA TGATCTCGGT GTCAGGCTTA TCCAGCGCAC CACCCGACAA TTTGCCGTGA CGGATATCGG CCAGGAATTT TATCGCCATT GTCTGGCGAT GATGGTTGAG GCCGATGCTG CGCTGGACGT GATCGACAGA ATGCGCACGG AACCGCAAGG CACGGTGCGG GTGAGTTGCC CGGCATCGGT CATTTATTTC CAGGTCGGTG AAATGATCGC CCGTTTCATG GCGCGATACC CAAAGGTGAA AATACATCTG GAAAGCACAA ACCGGCGCGT GGATGTTATC CGCGAAGGCT TCGATCTCGC TATCCGCGTC CGCTTTCCAC CGCTCGAGGA TAGCGATCTC GTCATCCGCA AGCTGGCGGA AAGCGAGCAA CGACTGGTGG CAAGCCCTGT ATTCGTCAAG GAGGGATGCA ACGCCGTCCC CGCCGACCTC GTCGACATGC CCGGCCTTGC CTGGGGATCA TCCCACAACA GTTTTGAATG GAACCTGCTT GGTCCGAACG GCACCACGGC TGAAATTCCC TATCAACCGC TGCTGATCAC GGAAGATATG GTTGCGCTGC GGCTGGCCGC TCTTCAAGGC ATCGGCGTTT GCCAGTTTCC CACAATGGTT GTCCGGGATG ATATAAAGAC TGGGCGGTTG GTTGATCTTC TGCCCGACTG GGCACCCCGC AGCGGCATCA TCCATGCTGC TTTTCCCTCG CGGCGTGGCC TGCTGCCTTC AGTGCGCGCA CTTCTCGATT TTTTGGTCGA AGAGTATGCC GCTCTATCCG CAAGCGAACA CAGGTCATGA
|
Protein sequence | MKGPAMADLN DMRFYVEVVE QGGFSAASRK LDMPRSRLSR RIALLEDDLG VRLIQRTTRQ FAVTDIGQEF YRHCLAMMVE ADAALDVIDR MRTEPQGTVR VSCPASVIYF QVGEMIARFM ARYPKVKIHL ESTNRRVDVI REGFDLAIRV RFPPLEDSDL VIRKLAESEQ RLVASPVFVK EGCNAVPADL VDMPGLAWGS SHNSFEWNLL GPNGTTAEIP YQPLLITEDM VALRLAALQG IGVCQFPTMV VRDDIKTGRL VDLLPDWAPR SGIIHAAFPS RRGLLPSVRA LLDFLVEEYA ALSASEHRS
|
| |