Gene Oant_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3944 
Symbol 
ID5381989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1359061 
End bp1360266 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID640836630 
Productmajor facilitator transporter 
Protein accessionYP_001372478 
Protein GI153011264 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCCA CTCAGAAAAC CGCATCCATA CCGTCAACGG TATGGATTCT TGGTTTCGTC 
AGCCTGCTGA TGGATATCTC TTCGGAAATG GTACAGACGC TGCTGCCACT CTATCTGGTG
GCCGGTCTCG GCGCTTCGGC CATGATGGTC GGATTCATCG AAGGGCTGTC AGTCGCCATC
GCAACGGTGA CCAAGCTTTT CTCGGGCGTC ATCTCCGACT GGACAGGCCG AAGGAAACCG
CTTGCCGTCG CAGGCTATGG GCTGGCCGCC ATTTCCAAGC TTATCTTCCC GCTGGCAACG
ACAGCGGGCG GTATCGTAAT GGCCAAGGCG ATAGACCGTG TTGGCAAGGG CATACGCGGC
ACGCCGCGCG ATGCCTTGAT TGCTGATGTG ACACCGCCGG AAATACGCGG CGCAGCCTTC
GGGCTGCGCA AGTCGCTCGA CACGGTCGGC GGCTTCGTCG GTCCGCTCAT TGCCATAGGG
CTGATGCTCG TAACCGGCGG CAACATCATC ACCATTTTCT GGATTGCAGC CATTCCGGCT
TTCATTGCGG TCGCGCTTCT GATTTTCGGC ATTCGTGAAC CGGAAACGCC CCCTAAACGC
CCCCTTGCTC GCTCCAAGGG ATTTCCACGA TTTGCCGATG CGGGCAAGCT GAACGCGACC
GTATGGATCG TGATTGCAGT CGCATCGATC CTTACCATGG CTCGTTTTAG CGAAGCATTC
CTGCTCCTCA AGGCGCAGGA AGCCGGGTTT GCAGCCGCAT GGGTCCCGAT CACCATGGTT
GTCATGCATG CCGTCTATGG GCTGACAGCC TATCCGGTTG GCGCGCTCTC GGACAGGTTG
GGGCGCAAGG GCCTGCTTGC CGCCAGTCTC GGCTTCCTGA TCGTCGCCGA TCTTGTGATT
GCCCAATCGA CCACGATCTA TCCGTTCCTT GCCGGCATCG TTCTTTGGGG CCTGCATATG
GGTTTTTCGC AGGGCATTCT CGCAACGCTC ATCGCCGACA CGGCACCAGG CCACCTCAAG
GGTACGGCCT TTGGCATGTT CAACGTGATA ACGGGTCTTG TCATGCTTGT CGGCAACATC
GGCGCCGGTT GGCTGTGGGA AAGCTATGGC TCCTCCGCCA CCTTCCTTGC CGGTGCAATT
CTATCCGCCG TCGCCCTGCT TAGTCTGGCG CTGCTGCCCG GCATCGCCGC CCGCAAGACA
GGTTAG
 
Protein sequence
MASTQKTASI PSTVWILGFV SLLMDISSEM VQTLLPLYLV AGLGASAMMV GFIEGLSVAI 
ATVTKLFSGV ISDWTGRRKP LAVAGYGLAA ISKLIFPLAT TAGGIVMAKA IDRVGKGIRG
TPRDALIADV TPPEIRGAAF GLRKSLDTVG GFVGPLIAIG LMLVTGGNII TIFWIAAIPA
FIAVALLIFG IREPETPPKR PLARSKGFPR FADAGKLNAT VWIVIAVASI LTMARFSEAF
LLLKAQEAGF AAAWVPITMV VMHAVYGLTA YPVGALSDRL GRKGLLAASL GFLIVADLVI
AQSTTIYPFL AGIVLWGLHM GFSQGILATL IADTAPGHLK GTAFGMFNVI TGLVMLVGNI
GAGWLWESYG SSATFLAGAI LSAVALLSLA LLPGIAARKT G