| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3727 |
|---|
| Symbol | |
|---|
| ID | 5381754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1113246 |
|---|
| End bp | 1113986 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640836413 |
|---|
| Product | protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| Protein accession | YP_001372262 |
|---|
| Protein GI | 153011048 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA GTCTGCCGGA GACAACTCCG TTCTTTGCTC GCGATCTGTC CATGCATCCA
TCGGCTTACA CGCCGTGGTA TAAGACCTCC GTCCTTCGCT CGCCTACTCG TGCTTTGCTT
TCGCTCGAAG GCACCAAAAG TGAAATTACG GGCCCGGTAT TCGGGCACAG TATGCTGCAC
GAGCTGGATA ATGACCTCAT CCTCAATTAT GCGCGCCCCG GCGAAATGCC GATAGGCCCA
CGCATTCTTG TGCATGGCCG TGTTCTGGAC GAGAGTAGCC GTCCTGTTCC AGGCGCACTG
CTGGAATTCT GGCAGGCCAA CGCTGGCGGG CGTTATCGCC ACAAGAAAGA AACCTATCTT
GCGGCCATCG ACCCCAACTT CGGCGGCGTC GGTCGCACGG TCACGGACGA AAACGGCTAC
TACTGGTTCA AGACCATCAA GCCCGGCCCG TACCCTTGGC CAAATGGTGT GAATGACTGG
CGTCCGGCTC ACATCCATTT TTCTGTGTTC GGTCATGGCT TTGCACAGCG CCTCATCACA
CAGATGTATT TCGAGGGCGA TCCGCTGATC TGGATTTGCC CTATCGTGAA AACTATTCCC
GACAAATCAG CTGTCGAACG GCTGGTCGCA CCTCTGGACA TGAGCGCTAA TTTGCCGATG
GATATGCTTG CCTACAAGTT CGACATTGTG TTGCGCGGGC GCCGCGCAAC CTTGTTTGAA
AATCGCCCGG AGGGCAACTG A
|
|---|
| Protein sequence | MKNSLPETTP FFARDLSMHP SAYTPWYKTS VLRSPTRALL SLEGTKSEIT GPVFGHSMLH
ELDNDLILNY ARPGEMPIGP RILVHGRVLD ESSRPVPGAL LEFWQANAGG RYRHKKETYL
AAIDPNFGGV GRTVTDENGY YWFKTIKPGP YPWPNGVNDW RPAHIHFSVF GHGFAQRLIT
QMYFEGDPLI WICPIVKTIP DKSAVERLVA PLDMSANLPM DMLAYKFDIV LRGRRATLFE
NRPEGN
|
|---|
| |