Gene Oant_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3548 
Symbol 
ID5382886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp914145 
End bp914984 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content56% 
IMG OID640836230 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001372083 
Protein GI153010869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.175971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAG CACGCACATC GCCCATTCGC ACCACTCTCG TTCATGCGGC CCTGATCTTC 
TACATGCTGA TCGCCGTGTT CCCGGTGGCG CTGACGCTGA TCAATTCGTT CAAGGATCGT
AATGCGATTT TCCGCACGCC GTTGCAGTTT CCGACACCGG AAAGTTTCAG CCTCATCGGC
TATGAAACGG TTCTGAAACA GGGCTCCTTC CTGACTTATT TTCAGAACAG CACCATCGTC
ACGGTGGTGA GCATCTTCCT TGTGATCCTG TTCGGTGCGA TGGCAGCCTT TGCGCTCGCT
GAATATCGCT TCAAGGGCAA CACGCTGATG GGGCTTTATC TCGCCATCGG CATCATGATC
CCGATCCGGC TCGGCACGGT TGCACTGCTG CAAGGCATGG TAGCCGCAGG TCTGGTCAAC
ACGCTGACGG CGCTGATCCT CGTTTATACC GCGCAGGGTC TGCCGCTTGC GATCTTCATC
CTGTCGGAAT TCATGCGAAC AGTATCCGAC GATTTGAAGA ATGCCGGGCG AATAGACGGC
ATGTCGGAAT ATGCGATCTT CTTCAAGCTG GTGCTGCCGT TGATCAGGCC TGCCATGGCC
ACGGTCGCCG TCTTCACCAT GATCCCGATC TGGAACGATC TCTGGTTCCC GCTGATCCTT
GCGCCAAGTG AAGCCACCAA GACGGTGACT CTCGGTTCGC AGCTGTTCAT CGGTCAGTTC
GTCACCAACT GGAATGCGGT TCTGTCAGCG CTTTCGCTGG CGATGTTCCC GATCCTCGTC
CTTTACGTCA TATTCTCGCG GCAGCTGATC CGCGGCATCA CCGCGGGGGC TGTAAAATGA
 
Protein sequence
MSKARTSPIR TTLVHAALIF YMLIAVFPVA LTLINSFKDR NAIFRTPLQF PTPESFSLIG 
YETVLKQGSF LTYFQNSTIV TVVSIFLVIL FGAMAAFALA EYRFKGNTLM GLYLAIGIMI
PIRLGTVALL QGMVAAGLVN TLTALILVYT AQGLPLAIFI LSEFMRTVSD DLKNAGRIDG
MSEYAIFFKL VLPLIRPAMA TVAVFTMIPI WNDLWFPLIL APSEATKTVT LGSQLFIGQF
VTNWNAVLSA LSLAMFPILV LYVIFSRQLI RGITAGAVK