Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3548 |
Symbol | |
ID | 5382886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 914145 |
End bp | 914984 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640836230 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001372083 |
Protein GI | 153010869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.175971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAG CACGCACATC GCCCATTCGC ACCACTCTCG TTCATGCGGC CCTGATCTTC TACATGCTGA TCGCCGTGTT CCCGGTGGCG CTGACGCTGA TCAATTCGTT CAAGGATCGT AATGCGATTT TCCGCACGCC GTTGCAGTTT CCGACACCGG AAAGTTTCAG CCTCATCGGC TATGAAACGG TTCTGAAACA GGGCTCCTTC CTGACTTATT TTCAGAACAG CACCATCGTC ACGGTGGTGA GCATCTTCCT TGTGATCCTG TTCGGTGCGA TGGCAGCCTT TGCGCTCGCT GAATATCGCT TCAAGGGCAA CACGCTGATG GGGCTTTATC TCGCCATCGG CATCATGATC CCGATCCGGC TCGGCACGGT TGCACTGCTG CAAGGCATGG TAGCCGCAGG TCTGGTCAAC ACGCTGACGG CGCTGATCCT CGTTTATACC GCGCAGGGTC TGCCGCTTGC GATCTTCATC CTGTCGGAAT TCATGCGAAC AGTATCCGAC GATTTGAAGA ATGCCGGGCG AATAGACGGC ATGTCGGAAT ATGCGATCTT CTTCAAGCTG GTGCTGCCGT TGATCAGGCC TGCCATGGCC ACGGTCGCCG TCTTCACCAT GATCCCGATC TGGAACGATC TCTGGTTCCC GCTGATCCTT GCGCCAAGTG AAGCCACCAA GACGGTGACT CTCGGTTCGC AGCTGTTCAT CGGTCAGTTC GTCACCAACT GGAATGCGGT TCTGTCAGCG CTTTCGCTGG CGATGTTCCC GATCCTCGTC CTTTACGTCA TATTCTCGCG GCAGCTGATC CGCGGCATCA CCGCGGGGGC TGTAAAATGA
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Protein sequence | MSKARTSPIR TTLVHAALIF YMLIAVFPVA LTLINSFKDR NAIFRTPLQF PTPESFSLIG YETVLKQGSF LTYFQNSTIV TVVSIFLVIL FGAMAAFALA EYRFKGNTLM GLYLAIGIMI PIRLGTVALL QGMVAAGLVN TLTALILVYT AQGLPLAIFI LSEFMRTVSD DLKNAGRIDG MSEYAIFFKL VLPLIRPAMA TVAVFTMIPI WNDLWFPLIL APSEATKTVT LGSQLFIGQF VTNWNAVLSA LSLAMFPILV LYVIFSRQLI RGITAGAVK
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