Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3496 |
Symbol | |
ID | 5382805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 858206 |
End bp | 858982 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640836178 |
Product | extracellular solute-binding protein |
Protein accession | YP_001372031 |
Protein GI | 153010817 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACCC TTCTGTCTTC GCTCATTGCC GCTGGCGTCG GTGCGCTGAT GATGCTCGCT CCCGCTCATG CGGACGACCT CGAAAAGGTC AAGCAGAGCG GCGAACTGCG CATCGGCATG AGCGGTGTTT TCCCGCCATT CAGTTTTGTT GATGGTCAGA ACCAGGTGGT CGGTTTCGAC GTCGATATCG GCACCGAAAT TGCCAAGCGC CTTGATGTAA AGCCGGTTGT CGTGACCATC GCTTTCGACG GCATCATTGC AGGCCTGCGT GCGGGCAAGT TCGATGTGGT CGTCGGCAGC ATGAGCATCA CGCCGGAACG CGAAAAGGCT GTCGATTTCG CAGGCCCTTA CTATCGCGGT GGCCGTGGAA TTTTCGTGAC GGAAACCTCG CCGGTGAAGT CCATGGACGA ACTGAAACAG GGCAAGACCA TTGCCGTGAC GCTTGGCGAA ACCAGCGACA AGTGGGCGCG CGAACAGGGT GGCTGGACCG TCCGTACCTA TAAGGGCATC CCGGAACTGC TGCTTGAGCT TCGTTCAGGT CGCGTGGACG CCATTGCATC GGATGACATT CCGATCCTGA TCGCCATCAA GGAAAGCGGC GAAAAGGTTC GTCAGCTCGA TACGCCTGAA CTTCAGGGCA CCGACAATGT CGGCATCGCT CTGCGCAAGG GTAACCCTGA GCTTAAGGAT GCGATCAACA AGGCTCTCGA CGACATGAAA GCGGACGGTA GCTACGAGAA AATCTCGACC AAGTGGATCG GTCGCGACAT CCGCTAA
|
Protein sequence | MKTLLSSLIA AGVGALMMLA PAHADDLEKV KQSGELRIGM SGVFPPFSFV DGQNQVVGFD VDIGTEIAKR LDVKPVVVTI AFDGIIAGLR AGKFDVVVGS MSITPEREKA VDFAGPYYRG GRGIFVTETS PVKSMDELKQ GKTIAVTLGE TSDKWAREQG GWTVRTYKGI PELLLELRSG RVDAIASDDI PILIAIKESG EKVRQLDTPE LQGTDNVGIA LRKGNPELKD AINKALDDMK ADGSYEKIST KWIGRDIR
|
| |