Gene Oant_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3448 
Symbol 
ID5382625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp803609 
End bp804349 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content57% 
IMG OID640836130 
Productshort chain dehydrogenase 
Protein accessionYP_001371983 
Protein GI153010769 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATA TGAAAAACAA GGTTGCCATC GTTACTGGAG CATCGCGCGG CATTGGCGCT 
GCCATTGCCG AAAGACTGGG TCGCGGCGGC TTTACTATCA TCGTCAACTA TGCGGGCAAT
GCTGCTCTTG CTGATGCCGT GGTCAGCAAG ATCGAGGCAT CAGGCGGCAT TGCGCGAGCA
GCACAGGCTG ATGTTGCCGA TCCTGTCGCA GTAAAGAGAA TGTTCGATGC GGCCGAAGAC
GCTTTCGGCG GCGTAGATGT TCTCGTCAAC AATGCCGGTA TCATGACCCT GTCGCCTCTC
GCCACAACAG AGGACGTAGA TTTCGACAAG CTCGTTTCGG TCAACCTCAA GGGCACCTTC
AATACCATGC GGGAGGCTGG CAAACGCCTC CGCAACAATG GGCGTATCAT CAATTTTTCT
ACCACTGTCG TCGGCCTGAA ACTGGAAAAC TACGGTGTTT ATGCTGCAAC CAAGGCCGCA
GTCGAAACGC TGACGGCCAT CATGGCCAAG GAAATGCGCG GTCGAAACAT CAGCGTCAAT
GCCGTTGCGC CCGGCCCCAC TGCGACCGAT CTCTTTCTCG ATGGAAAATC CGAAGAGCTG
GTCGCACGCA TGGCCAAGAT GAGCCCGCTC GAACGTCTGG GGACCCCGAA AGACATTGCA
GGGGTGGTTG CGTTCCTGGC CGGACCCGAC GGTGCATGGG TAAATGGCCA GATACTGCGC
GCCAATGGTG GGATCATCTA G
 
Protein sequence
MSDMKNKVAI VTGASRGIGA AIAERLGRGG FTIIVNYAGN AALADAVVSK IEASGGIARA 
AQADVADPVA VKRMFDAAED AFGGVDVLVN NAGIMTLSPL ATTEDVDFDK LVSVNLKGTF
NTMREAGKRL RNNGRIINFS TTVVGLKLEN YGVYAATKAA VETLTAIMAK EMRGRNISVN
AVAPGPTATD LFLDGKSEEL VARMAKMSPL ERLGTPKDIA GVVAFLAGPD GAWVNGQILR
ANGGII