Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3448 |
Symbol | |
ID | 5382625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 803609 |
End bp | 804349 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640836130 |
Product | short chain dehydrogenase |
Protein accession | YP_001371983 |
Protein GI | 153010769 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATA TGAAAAACAA GGTTGCCATC GTTACTGGAG CATCGCGCGG CATTGGCGCT GCCATTGCCG AAAGACTGGG TCGCGGCGGC TTTACTATCA TCGTCAACTA TGCGGGCAAT GCTGCTCTTG CTGATGCCGT GGTCAGCAAG ATCGAGGCAT CAGGCGGCAT TGCGCGAGCA GCACAGGCTG ATGTTGCCGA TCCTGTCGCA GTAAAGAGAA TGTTCGATGC GGCCGAAGAC GCTTTCGGCG GCGTAGATGT TCTCGTCAAC AATGCCGGTA TCATGACCCT GTCGCCTCTC GCCACAACAG AGGACGTAGA TTTCGACAAG CTCGTTTCGG TCAACCTCAA GGGCACCTTC AATACCATGC GGGAGGCTGG CAAACGCCTC CGCAACAATG GGCGTATCAT CAATTTTTCT ACCACTGTCG TCGGCCTGAA ACTGGAAAAC TACGGTGTTT ATGCTGCAAC CAAGGCCGCA GTCGAAACGC TGACGGCCAT CATGGCCAAG GAAATGCGCG GTCGAAACAT CAGCGTCAAT GCCGTTGCGC CCGGCCCCAC TGCGACCGAT CTCTTTCTCG ATGGAAAATC CGAAGAGCTG GTCGCACGCA TGGCCAAGAT GAGCCCGCTC GAACGTCTGG GGACCCCGAA AGACATTGCA GGGGTGGTTG CGTTCCTGGC CGGACCCGAC GGTGCATGGG TAAATGGCCA GATACTGCGC GCCAATGGTG GGATCATCTA G
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Protein sequence | MSDMKNKVAI VTGASRGIGA AIAERLGRGG FTIIVNYAGN AALADAVVSK IEASGGIARA AQADVADPVA VKRMFDAAED AFGGVDVLVN NAGIMTLSPL ATTEDVDFDK LVSVNLKGTF NTMREAGKRL RNNGRIINFS TTVVGLKLEN YGVYAATKAA VETLTAIMAK EMRGRNISVN AVAPGPTATD LFLDGKSEEL VARMAKMSPL ERLGTPKDIA GVVAFLAGPD GAWVNGQILR ANGGII
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