Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3446 |
Symbol | |
ID | 5382623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 795821 |
End bp | 797908 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640836128 |
Product | penicillin-binding protein 1C |
Protein accession | YP_001371981 |
Protein GI | 153010767 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGGC GGTGGAAAAT AGCGATTGGC GGTGCCGCGT TTCTCGGCAT CGCCGCTGTA GGAACGGTTG CTGGGCTTGA CTGGCTCGAC CGCGCTTATC CTCCGCCTTT GCCGGAACGG CTGACCATTT CCACCGAAGT CATGGATCGT GACGGCGCTT TGCTCCGCGC CTATGCAACG CCGGACGGCT ATTGGCGGCT CAATACACGG ATTGAGGATG TCGATCCGAA ATTCGTGAAA ATGCTGATCG CCTATGAGGA CAAGCGGTTC TACGATCATG GCGGTATTGA TGGCTGGGCG CTGTTGCGCG CCGCTTATCA GCTTGCAGGG AGTGGTCGTA TTGTTTCCGG CGGCTCCACA CTGTCCATGC AACTTGCCCG CCTGATCGAA CCTCGCGAAA GCCGCAGCTT CGGCTCCAAG TTCCGACAGC TGGCGCGTGC AATCCAGATC GAACGGCGGT TAAGCAAGTC TGAAATTCTT GAACGCTATC TGACGCTTGC ACCTTATGGC GGCAATCTGG AGGGCGTGCG GTCGGCATCA CTTGCCTATT TTGACAAGGA GCCGCTTCGC CTCACCACTT CGGAAGCAGC ACTTCTTGTG GCTCTGCCGC AATTGCCTGA ACGCCGCCGC CCGGATCGCG AGATGAAGAA CGCGGTTGCC GCGCGGGATC GTGTGTTAAC ACGCATGGTA ACCTCTGCAG TTTTCACCAG CGAGGAAGCC GAACGTGCAT CGCGTGAGCG CATATCCGCG ACGCGTCATC CGCTGCCTGC ATTGGCCGCC CACTTTGCCG ATCTCGCATT GAAGCCGGCA CCGACCGAGG CTCGGCATCA CCTGACGCTT AAGAAGTCGG TGCAGGCTGG GCTTGAAGTT GTGGCACGCG AAGCTGCTGC GAAGCTTGGG CCAAAAGTAT CGGTCGCCAT GGTGCTGGCC GACAGTCGCA ACGGCAATAT CTTAGGCGAA GTCGGCTCCG CTGATTATTT TGATGGCAAG CGGCAGGGCT GGATCGATAT GACCCGCGCC GTGCGCTCGC CCGGTTCAAC GTTAAAACCT TTCATCTATG GGCTGGCCTT CGAGCAGGGA CTGATTGCGC AGGAAACCAT CATTGAGGAC CGCCCGCAGG ATTTTGCAGG CTATCGTCCA CGCAATTTTG ATATGAGCTA TCAGGGCGAT GTCAGCATCC GTCAGGCGCT GCAAATGTCA CTGAATGTTC CGACCATCAG TCTGCTTGAT GCTGTCGGGC CTGCACGGCT CACGACGCGC ATTCGTCAGG CGGCGGTTAA TCTGCAACTG CCGAAAGGCG AAGCGCCGGG ACTGGCTATC GGCCTTGGTG GCGCGGGCAT CAGCCTGCGC GATCTGGTGC AGCTTTATAC AGGCCTTGCC AATGGCGGTC GCGGTGCAGC CCTTCGTGAC GGCACCGAAG GTACCGAGCC GGTGCAGCCA TCGGCTCCTA TTCTGAGCGA GCAGGCATCG TGGCAGATTG GCGATATTCT GGCCGGTGTC GTGCCGCCGC AGGGTGCTAA ACGCCTCGGC CTCGCTTACA AGACCGGCAC GTCCTATGGA TATCGTGATG CATGGTCGGT CGGTTATGAC GGGCGTTATG TGCTGGGTGT CTGGGTCGGG CGTGCCGATG GTGGCTCGGT GCCGGGACTC GCGGGCTATG TTTCGGCGGC TCCAATCCTG TTTGAAGCCT TTGTACGTTC AGGGGTTGCG TCAGTGCCGC TGCCGCGTGC GCCTGCTGGC GCATTTCGCA CGGCACGCGC CGATCTTCCG GTGACGCAGA TACGTTTTTC GTCTGCGAGC GATCCTCTGC CGGTTCTCAA AGCCACGATT GAGCCTGCAC CGCGCATCGT GTTTCCACCT GATGGCGCGC ATGTCGAATT GAAAGCCCTG ACCGACAATG CATCGCCGCT GGTGCTGAAA TTACAGGGCG GACGCGCACC GTTTCGCTGG CTTGCCAATG GCAAGCCCAT TGCTGAGATC GAGCGGCGGC GGACAACAAA CTGGCAACCG GACGGAACCG GATATTCAAC GTTGACCGTG GTTGACGCTG CCGGACGGGC CGCCAGCGTC AACATTTTCG TAGAATAA
|
Protein sequence | MKRRWKIAIG GAAFLGIAAV GTVAGLDWLD RAYPPPLPER LTISTEVMDR DGALLRAYAT PDGYWRLNTR IEDVDPKFVK MLIAYEDKRF YDHGGIDGWA LLRAAYQLAG SGRIVSGGST LSMQLARLIE PRESRSFGSK FRQLARAIQI ERRLSKSEIL ERYLTLAPYG GNLEGVRSAS LAYFDKEPLR LTTSEAALLV ALPQLPERRR PDREMKNAVA ARDRVLTRMV TSAVFTSEEA ERASRERISA TRHPLPALAA HFADLALKPA PTEARHHLTL KKSVQAGLEV VAREAAAKLG PKVSVAMVLA DSRNGNILGE VGSADYFDGK RQGWIDMTRA VRSPGSTLKP FIYGLAFEQG LIAQETIIED RPQDFAGYRP RNFDMSYQGD VSIRQALQMS LNVPTISLLD AVGPARLTTR IRQAAVNLQL PKGEAPGLAI GLGGAGISLR DLVQLYTGLA NGGRGAALRD GTEGTEPVQP SAPILSEQAS WQIGDILAGV VPPQGAKRLG LAYKTGTSYG YRDAWSVGYD GRYVLGVWVG RADGGSVPGL AGYVSAAPIL FEAFVRSGVA SVPLPRAPAG AFRTARADLP VTQIRFSSAS DPLPVLKATI EPAPRIVFPP DGAHVELKAL TDNASPLVLK LQGGRAPFRW LANGKPIAEI ERRRTTNWQP DGTGYSTLTV VDAAGRAASV NIFVE
|
| |