| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3220 |
|---|
| Symbol | |
|---|
| ID | 5382302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 540788 |
|---|
| End bp | 541816 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640835903 |
|---|
| Product | P-type conjugative transfer protein TrbG |
|---|
| Protein accession | YP_001371757 |
|---|
| Protein GI | 153010543 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
|---|
| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000858475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA CGACTTTCCG TAGAGCCGGT TTTCCGGTTT TCCGTAAACC CGCTTTCGCG
GCTTTGCTGC TTTCCGCGAC CATGTTGGCC GGCTGCGCGA CCAACCGGAC GCCGCAATTC
AACTATGACG CCGACGTGCC GCCGCTGCCC ACCGTGCAGA CGGTCGCCAC CGACGACCGG
CCCCGGCCGC TTCACACGCC GCCGGCCTGG ACGGTCGCGC GGGGCGGAAC TGCTGCCAGC
ACTCCGGACG GCCGTGTCGA AAACGCCAAT GCCGCCGCCC GTGTCGAACC TCGCCGTGAG
GGCTATTACA ACGCCATCCA GATTTATCCG TGGAGCGAAG GCGCGCTCTA TCAGGTCTAT
GCGGCCCCCG GCCAGATCAC AAATATCGCG CTGGCGCCGG GCGAAAGCCT GACCGGCGCG
GGACCTATTG CGGCCGGGGA TACGACACGA TGGATCATTG GCGACACCGA ATCCGGTTCG
GGCGCGAACC GCCGCGTCCA CATCCTCGTG AAGCCGACAC GCCCGGACAT TTCCACCAAC
CTTGTCGTGA CCACCGACCG GCGCACCTAC ATGATCGAGC TGCGCGCGCG GGAATCGCTC
TACATGCCTT CCGTCGCATG GGCCTATCCC GCGGCGCCGG CGGGAAGCCG TGCCACCACG
CCCGCCGCGC CCATCATCCC CGCCGAGGCG GCGCGGAACT ATCGCTACGG ATTGCAGGTG
CGGGGCGACA GCCCGCCATG GCGGCCGCTC TCCGTCTTCG ACGATGGCCG CCGCGTCTAT
GTCATTTTCT CGCGCGGCAT CGTGCAGGGC GAAATGCCGC CTTTGTTCGT CATCGGGTCG
GACGGAGAAA CGCAGATCGT CAACAGCCGT GTCCACCAGA ATGTCCTGAT CGTGGACCGC
CTGTTCGGTG CGGCCGAACT GCGCCTTGGC AGCGGCGATC GGCAGCAAGT GGTCAGGATC
GTCCGCATCA ACCCGACGCA GGCCGCAGCA GAACCAGCCA GCACGACCAC GGGAGGATCG
TCGTCATGA
|
|---|
| Protein sequence | MTRTTFRRAG FPVFRKPAFA ALLLSATMLA GCATNRTPQF NYDADVPPLP TVQTVATDDR
PRPLHTPPAW TVARGGTAAS TPDGRVENAN AAARVEPRRE GYYNAIQIYP WSEGALYQVY
AAPGQITNIA LAPGESLTGA GPIAAGDTTR WIIGDTESGS GANRRVHILV KPTRPDISTN
LVVTTDRRTY MIELRARESL YMPSVAWAYP AAPAGSRATT PAAPIIPAEA ARNYRYGLQV
RGDSPPWRPL SVFDDGRRVY VIFSRGIVQG EMPPLFVIGS DGETQIVNSR VHQNVLIVDR
LFGAAELRLG SGDRQQVVRI VRINPTQAAA EPASTTTGGS SS
|
|---|
| |