Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3218 |
Symbol | |
ID | 5381535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 538747 |
End bp | 540105 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640835901 |
Product | conjugal transfer protein TrbL |
Protein accession | YP_001371755 |
Protein GI | 153010541 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.191716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGAA CGGGGGTCAT CGATAATTTT CTCGGCATCT TCACCAGCTA TATCGACTCC GGCTTCGGCC TGCTCGGCGG CGAGGTGGCG TTTATCGCCA CGACGCTGAT CGTCATCGAC GTGACGCTCG CCGCACTGTT CTGGGCCTGG GGCGCCGACG GCGACATCAT TGCGCGGTTG GTGAAAAAGA CGCTGTTCGT CGGCGTCTTC GCCTATCTCA TCAGCAACTG GAACAATCTC GCACGGATCG TCTTCGAGAG CTTCGCCGGG CTCGGGCTCA TGGCGTCCGG CACTGGCTTC TCGGTTGCCG ATCTGCTGCG CCCCGGCCGC GTTGCCCAAA CCGGGCTGGA CGCCGGTCGC CCGCTGCTGG AATCTATTTC GGACCTGATG GGCTGGATCG CCTTCTTCGA GAACTTCATC CAGATCGCGT GCCTGTTGTT CGCCTGGGCG CTGGTGGTGC TGGCCTTTTT CATCCTGGCA ATCCAGCTTT TCGTCACGCT GATCGAGTTC AAGCTGACCA CGCTGGCCGG CTTCGTGCTG ATTCCATTCG GCCTGTTCGG CAAGACCGCC TTCATGGCCG AGCGGGTGCT GGGCAATGTG ATCTCCAGCG GTATCAAGGT GCTGGTCCTC GCCGTCATCA TCGGCATCGG CTCCACGCTC TTCGGCCAGT TTACCGCAGG CTTCGGCGGT GCGACCCCGA CAATCGACGA CGCCATGGCG ATCGTGCTGG CAGCCCTTTC CCTTCTCGGC CTCGGCATCT TCGGCCCCGG CATCGCCACC GGCCTCGTCT CCGGAGGCCC GCAACTCAGT GCCGGCGCCG CCGTCGGGAC TGGCCTTGCG GTTGGCGGCG CTGCGATCGC AGCCGGTGGC GCGACCATGC TCGCGGCGCG GGGTGGCGCA GCCGCACTCT CGGGCGGGGC AGCACTTGCC CGCGGCGGTG CCTCGGCCGC CGGTGCGGCT TCGTCCGCCT ATACCCTCGG CTCCTTGGGC GGGTCCGGCA CGGCCGGGGT CGCCTCCGGC CTTGGCGGTG TGGCGCGCGC CGGAGCCTCC GCCGCCGTTT CACCACTCAA GCGCGCCGCC TCCCGCGCCA GCGACAGCCT GAAATCCAGC TATTCCGATG GTGCGAAAGC CGGATTCGCG GCATCCGGCG GCACGTCGAC CATGGGCACC GTCGGCAGAG ATTCGTCGCC TGCGCCGTCA ACCCCCTCAA CCCCTGATGG GCCGCCGGCC TGGGCGCAGC AGATGCGGCG TGGCCGGGCC ATGAGCCACG GCGTCACGGC TGCTGCTCAT GCTGTCCGAT CCGGCGACAG CCACGGCGGC GGCTCCTCCG TCAGCCTTTC CGAAAGTGAC CGCACATGA
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Protein sequence | MGGTGVIDNF LGIFTSYIDS GFGLLGGEVA FIATTLIVID VTLAALFWAW GADGDIIARL VKKTLFVGVF AYLISNWNNL ARIVFESFAG LGLMASGTGF SVADLLRPGR VAQTGLDAGR PLLESISDLM GWIAFFENFI QIACLLFAWA LVVLAFFILA IQLFVTLIEF KLTTLAGFVL IPFGLFGKTA FMAERVLGNV ISSGIKVLVL AVIIGIGSTL FGQFTAGFGG ATPTIDDAMA IVLAALSLLG LGIFGPGIAT GLVSGGPQLS AGAAVGTGLA VGGAAIAAGG ATMLAARGGA AALSGGAALA RGGASAAGAA SSAYTLGSLG GSGTAGVASG LGGVARAGAS AAVSPLKRAA SRASDSLKSS YSDGAKAGFA ASGGTSTMGT VGRDSSPAPS TPSTPDGPPA WAQQMRRGRA MSHGVTAAAH AVRSGDSHGG GSSVSLSESD RT
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