| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3189 |
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| Symbol | |
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| ID | 5382324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | + |
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| Start bp | 513800 |
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| End bp | 514345 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640835872 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_001371726 |
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| Protein GI | 153010512 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.110691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCGCT TTCGCTATGT CATGGTGACG ACGGTTGCCA CGCTCGGGAT CGCCTTTGCC
GGATTCGTTC CGACTGCGCC AAGGCTGGTC TGGAACGCAT CGGCCAGCGT GCCGATCGGG
TTCTATACTG TCGCACCCGA CGACCGGATC GCGGTGCCCG ATCTGGTCGC CGTCATCCCA
CCCGAACCCT TCGCCTCGTT TATGGTCGAG CGCGGCTACG TCGCACGCGA CGTGCCGCTT
CTGAAGCACG TTCTCGGCCT GCCCGGACAG CGCCTGTGCC GCGATGGCCG CGCCATTATC
GTCGACGGCG TTCCGCTCGG CGAGGCGCGC GACCACGACA GCTTCGGCCG AGACCTGCCG
GTCTGGCAGG GCTGTCGCGT CATCGCCGAG GGCGAAGTGT TCCTGATGAA CCCGGACGTC
GGCGACAGCC TCGACGGCCG CTATTTCGGC CCGTTCCCCG CCTCGGCGGT GATCGGCCAC
GCGATCCCGC TTTTCACCGA CGAAGACGGC GAGGGCCGCT TTGTCTGGCG CGCGCCGATG
CGGTGA
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| Protein sequence | MTRFRYVMVT TVATLGIAFA GFVPTAPRLV WNASASVPIG FYTVAPDDRI AVPDLVAVIP
PEPFASFMVE RGYVARDVPL LKHVLGLPGQ RLCRDGRAII VDGVPLGEAR DHDSFGRDLP
VWQGCRVIAE GEVFLMNPDV GDSLDGRYFG PFPASAVIGH AIPLFTDEDG EGRFVWRAPM
R
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