| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3110 |
|---|
| Symbol | |
|---|
| ID | 5382506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 427841 |
|---|
| End bp | 428833 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640835787 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001371647 |
|---|
| Protein GI | 153010433 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCC ATAATATTGC ACCGGGCTTC GTCGAGGATG CGCTCGAAAG CGTGCGTGTC
CGGGGGATGG ATACGGCTGC CCTGATGGCA AAGATCGGCT TGCCGGAGAC AGTGACAGAA
CCCGTCACTA ATGTGGAATA TGGTCGTTTG TGGTGGCTGA TTGCCGAAAC GATCAACGAC
GAATTCTTTG GGCTGGCTGC AAGGCCGATG CGCCCCGGCA GCTTCAATCT GCTTTGTCAT
GCTGTGCTGC ATGCTGGCAC GCTGGAACGG GCTTTGCGAC GGGCTTTGCA GTTTCTCAAT
GTAGTGCTGG ATGATCCGCG GGGCGAATTG CGGATCCGCG ATGGCATGGC CCATGTCGTT
CTGACCGATG CCGGGCACCC GAGACCTGCC TTTGCTTATC GTGCCTATTG GCTGATCCTG
ATGGGTGTGG TCTGCTGGCT GATCGGGCGA CGTATTCCGT TGCGGACGCT CGACTTTGCT
TGTCCGGCGC CGGTCCACCG TCAGGACTAT CACAAGTTCT TCGGAGCGCC GGTCCTGTTC
GACCAGCCGG TGACGCGACT GGTTTTTTCG TCGTCCTATC TATCACTGCC GATCATTCGC
AGCGATGTAG CGCTGGACAG TTTTTTACGA GAGGCTCCCG CCAATATTCT GATCCGCTAT
CGTCATGATA ATGATCTTTC CGCAAGGGTA CGCGCGCAAT TGAATGCTTT GCCAATCACA
GACTGGCCTT CTTTTGAAGA ACTCGCGAAG GGGCTTGGCA TGTCCGTACC GACCTTGCGA
CGCAGGCTGC GCGGGGAGGG GCAGAGCTTT GGCACGATCA AGGATGAGTT GCGGTTCGTT
ATTGCTGAAA GGCTTTTGCA GGAAAGCAGG TTGAGCGTGG CGGAGGTGGC TGCCGAACTT
GGCTACAGTG AGCCGAGCGC CTTTTATCGC GCCTTCCATA AATGGATGGG GCAAAGCCCT
GGGCGGTTTC GGACAATACA ACAGGAGGAA TAA
|
|---|
| Protein sequence | MERHNIAPGF VEDALESVRV RGMDTAALMA KIGLPETVTE PVTNVEYGRL WWLIAETIND
EFFGLAARPM RPGSFNLLCH AVLHAGTLER ALRRALQFLN VVLDDPRGEL RIRDGMAHVV
LTDAGHPRPA FAYRAYWLIL MGVVCWLIGR RIPLRTLDFA CPAPVHRQDY HKFFGAPVLF
DQPVTRLVFS SSYLSLPIIR SDVALDSFLR EAPANILIRY RHDNDLSARV RAQLNALPIT
DWPSFEELAK GLGMSVPTLR RRLRGEGQSF GTIKDELRFV IAERLLQESR LSVAEVAAEL
GYSEPSAFYR AFHKWMGQSP GRFRTIQQEE
|
|---|
| |