Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3064 |
Symbol | |
ID | 5381983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 376611 |
End bp | 377567 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640835741 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001371601 |
Protein GI | 153010387 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00195714 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA CACGCAGGAC AATTGCGCGC GGTTTTGCGA TTGCAGCCGT CTCGGCAACA TTGGCAGGCG GTGTTGTCAT GCCAGCATGG GCCGCTGATC TGATCGCAAT CATCACACCA TCGCACGACA ATCCATTCTA CAAAGCTGAA GCCGTGGGTG CTGAAGCCAA AGCCAAGGAA CTTGGCTACG AAACACTGAT CCTTCAGCAT GACGACGATC CAACCAAGCA GTCACAGCTT GTCGATACGG CAATCGGTCG TGGCGCAAAG GCAATCATTC TCGACAATGC TGGCTCGGAA GCATCGATTG CCGCCGTTCA GAAGGCCAAG GATGCCAAAG TCCCTTCATT CCTGATCGAC CGTGAAATCA ATGCCTCAGG CGTTGCAGTG TCGCAGATTG TTTCCAACAA CTATCAGGGC GCGCAGCTCG GTGCGGAAGA ATTCGTCAAG CTGATGGGCG AAGTAGGCAA TTATGTCGAG CTTCTCGGTC GCGAATCCGA CCTCAATGCT GGCACCCGCT CCAAGGGCTA TCACGACGTC ATCGATGAAT ATCCAGACAT GAAGATGGTT GCGCAGCAGT CGGCCAACTG GAGCCAGACC GAAGCCTTCA CAAAGATGCA GAGCATTTTG CAGGCAAATC CCGACATTAA GGGTGTGATT TCCGGCAACG ACACCATGGC CATGGGTGCC TGGGCAGCGC TTGAAGCTGC AGGCCGCAAG GACGTCATCG TTGTCGGCTT CGACGGCTCC AACGATGTCC GCGACTCCAT CAAGGCCGGT GGCATCAAGG CAACGGTTCT TCAGCCAGCC TATGCTCAGG CACAGATGGC TGTCGTTCAG GCTGACGAAT TCATCAAGAC CGGTAAGGGC CCTGCTGAAG AAAAGCAGCT GATGGACTGC GTCCTCATCA ATCCTGACAA CGCAGACAAG CTCGAAACTT TCGCTTTGAA GGACTAA
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Protein sequence | MKFTRRTIAR GFAIAAVSAT LAGGVVMPAW AADLIAIITP SHDNPFYKAE AVGAEAKAKE LGYETLILQH DDDPTKQSQL VDTAIGRGAK AIILDNAGSE ASIAAVQKAK DAKVPSFLID REINASGVAV SQIVSNNYQG AQLGAEEFVK LMGEVGNYVE LLGRESDLNA GTRSKGYHDV IDEYPDMKMV AQQSANWSQT EAFTKMQSIL QANPDIKGVI SGNDTMAMGA WAALEAAGRK DVIVVGFDGS NDVRDSIKAG GIKATVLQPA YAQAQMAVVQ ADEFIKTGKG PAEEKQLMDC VLINPDNADK LETFALKD
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