Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3028 |
Symbol | |
ID | 5382192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 332422 |
End bp | 334239 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640835705 |
Product | hypothetical protein |
Protein accession | YP_001371565 |
Protein GI | 153010351 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.29742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTGC GCTTTGCCAA AGACGAGCGC GGTAATTTTG CGATGATAAT GGCTTTGGTG CTGGTGCCCC TGTTGCTTGC CGGCATGGTT GCAGTCGACT CCGCCAATCT CATGCGCGTG CGCAACAATG TGCAGGCTTC GCTCGATGCT GCGGCACTTG CTGTGGGTAG GAGATTTTCC ACTGGCGAAA GTCAAACTGT CGTGCAGGTC TACGGTGCGC AAGTTTTTAC CGCCAACCTT ACCGCACTGA GCGCAGATGC GGTCAATTTC GACGTCGCTT TTCCCAAAGA TAAAACAACT GATCAACAGA TACAGGCGAC CGCTGGATTC ACTTATAAGT CCCTGTTTGG TGTCATTGCT TCTCGCCTTA CAGGAGATGA TTGGGATCAA AACCAATATA CGCTCAGCTC TTCGGTCAGG CTTAAGAACA CGATTGAAGT CGCTCTCGTT CTCGACAATT CCCGCTCCAT GGATGAAACC AGAAGCGGGT CGACAAAAAA GCGCATCGAC CTTCTGAAAG AAGCCGCCTC ACAGCTCGTG GAGACAATGG CCGCGCAATC CACGCTCATA ACCCACGTTG AAAACCCTGT GCAATTTTCA CTCGTTCCCT TTGCTGGTTC AGTAAATGTC GGCCCGCAAT ATTTGAACGC AGCCTGGATG GATCCGGAAG GCAGGTCTCC CGTCAATCTC GAAAACTTTA CGCTGCCTGT CACCATCGAC AGTACACGCA AGATAGAAGA AAAGCCGGTA GGCAGCGGGC GATACTACAA ATCCGGAACT GGCTGGGGAG AACGCAATAA CAAACCTTAT TCGCGTGCAG AACTTTATGC CGACCTTTCC CTGCGATCGA AAGAGACTTG GCTCCCTTGG CAGGGTTGTG TCGAGTCTCG TCCGGGCACC TATGCGCTGG ATGTAACGCC TCCTTCTGAC AACAACCCAG ACACATTATT TGTCCCCATG TTCGGCCCGG CCGAGTACTA CAATACCGAT AGCAGGGGAA ACGTCACTTC CACCGTTTTG AACAGCTGGT GGCAAGACGA CACATCCTTG GCTTACTCGC CCCGGCAAAG CGATCTCAAG AAATACTATC TGCGCGATTC CCTCGACAAG ATTTACCGAG GTGGCAGATC GAATGATGGT GGCCCCAACT ATAGCTGCAC ATCATCACCT CTCACCCCAT TGACGGACGT CACTACCGAA CAGGGGATGA AAACAATTCA AACCGCAATC AAGGCGATGG TACCAAGCGG CGGTACGAAT GTTCCCGAGG CTATGGCCTG GGGCTGGCGA ACGATCGTCC GAGGAGCACC GTTTACAGAA GCCCGGCCTT CGACCGAACG CGGCAATGAT AAAGTTGTGA TCGTGCTGAC CGACGGCGCC AACACCTATT ATAAATATGA CGGACTGGCT GGCTCGGGTC CCGACAGAGC TGCAAACTTT TCCTACTATT CAGCGCACGG CTACACTGCT CGCATAACCA AACACTACAG CCAGGCCCGT TTATTTCAGG AAAGCGGCGT TTCGGTTTCG CAAAATAACA GTACATATAC GAAGGCTATG AATGCGCGTT TTGCAAAGCT CTGCGACAAC GCCAAGTCAG CCAATATCAT CGTTATGACA GTCGCATTGG ATCTCAGCGA GACGAACAGC ACCGAGAAAG CACAAATAGA TCTGTTGAGA TCCTGCTCTT CAAACTCGCG CGTTCGCACG GAGAGCGGCA GACCAGCCAA GCTTTTCTGG AACTCAACCG GCGGTGAACT AAGCGAAACA TTCAGGCAGA TCGGCGACGA ACTCTCCAAT TTGCGCATTG TGGATTGA
|
Protein sequence | MSLRFAKDER GNFAMIMALV LVPLLLAGMV AVDSANLMRV RNNVQASLDA AALAVGRRFS TGESQTVVQV YGAQVFTANL TALSADAVNF DVAFPKDKTT DQQIQATAGF TYKSLFGVIA SRLTGDDWDQ NQYTLSSSVR LKNTIEVALV LDNSRSMDET RSGSTKKRID LLKEAASQLV ETMAAQSTLI THVENPVQFS LVPFAGSVNV GPQYLNAAWM DPEGRSPVNL ENFTLPVTID STRKIEEKPV GSGRYYKSGT GWGERNNKPY SRAELYADLS LRSKETWLPW QGCVESRPGT YALDVTPPSD NNPDTLFVPM FGPAEYYNTD SRGNVTSTVL NSWWQDDTSL AYSPRQSDLK KYYLRDSLDK IYRGGRSNDG GPNYSCTSSP LTPLTDVTTE QGMKTIQTAI KAMVPSGGTN VPEAMAWGWR TIVRGAPFTE ARPSTERGND KVVIVLTDGA NTYYKYDGLA GSGPDRAANF SYYSAHGYTA RITKHYSQAR LFQESGVSVS QNNSTYTKAM NARFAKLCDN AKSANIIVMT VALDLSETNS TEKAQIDLLR SCSSNSRVRT ESGRPAKLFW NSTGGELSET FRQIGDELSN LRIVD
|
| |