Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_2928 |
Symbol | |
ID | 5382227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 225519 |
End bp | 226721 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640835604 |
Product | major facilitator transporter |
Protein accession | YP_001371465 |
Protein GI | 153010251 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACGA TGACGTCTCA CGACAGCGCG ACGAAGACGG CCGGTTTCAA CTGGCCGCTT CTGGCGCTTG CAATCGGTGC CTTCGGTATT GGCACCACTG AATTTGCACC AATGGGGCTG CTGCCAGTCA TTGCCGACGG CGTTGACGTT TCCATCCCGA CAGCCGGGCT TCTGGTCAGC GCCTATGCCA TCGGCGTGAT GGTCGGCGCA CCAATCATGA CGCTTGCCTT CGGGCGGTTC GGCAAACGCA CGGCCCTGAT GCTGCTGATG GGTATTTTCA CGCTTGGCAA CATCCTGTCG GCTCTCGCAC CGGATTACTG GACGCTGCTT GCAGCGCGCT TGGTAACGAG CCTCAATCAC GGTGCATTTT TCGGCCTCGG TTCCATTGTT GCAGCCAGCG TCGTGCCTCC TGAAAAGCGG GCAAGCGCCG TTGCCACCAT GTTCATGGGT CTGACAATTG CCAATATCGG CGGCGTCCCG GCTGCGACCT GGATCGGCCA GCAGATCGGC TGGCGCATGT CATTTGCCGG TACTGCTGTT CTGGGTCTGC TCGCCATCTC GGCGCTCTGG CTTTCACTGC CACGCGGTGA AGCAGGCAAG ATGCCCGACA TCCGTCGTGA GCTTGGCGTC CTGATGCGCC CGACCGTGCT GATGTCGCTC GCAACAACCG TCATGGGCGC TGGCGCCATG TTCACGCTCT ACACCTATGT AGCACCTGTA CTGACCGACC TTACCGGCGC TTCGGAAGGC TTCGTGACGC TGGCGCTCAT TCTTATCGGC GTGGGCTTCA CTATCGGCAA CGCACTCGGC GGACGCCTCG CCGACTGGTC GCTCAATGGC GCGACACGGA TGTTTCTTGC AGCACTTGCC ATCATCAGTC TGGTACTGCC GTTCCTGCTG GGAAGCCATA TCGGTGCGGC AATCGGCCTG CTCGCCTGGG GTGCGGCGGC TTTCGCCATC GTTCCTCCGG TTCAGACCCG CGTGATGCAG GCTGCATCGG AAGCACCGGG GCTGGCATCG TCGATCAATA TCGGTGCGTT CAACCTCGGC AATGCGGTGG GCGCGGCCCT TGGCGGCGGC GTCATCAGCG CAGGCTATGG CTATGCAGCC ATTCCCGTCG CAGGCGGCCT TCTGGCAGCG GCAGGACTGT TGTTCACACT GTCCCGCCGC CCGAAAACAG CACTGGCGCC ATCGGCCTGC TAA
|
Protein sequence | MSTMTSHDSA TKTAGFNWPL LALAIGAFGI GTTEFAPMGL LPVIADGVDV SIPTAGLLVS AYAIGVMVGA PIMTLAFGRF GKRTALMLLM GIFTLGNILS ALAPDYWTLL AARLVTSLNH GAFFGLGSIV AASVVPPEKR ASAVATMFMG LTIANIGGVP AATWIGQQIG WRMSFAGTAV LGLLAISALW LSLPRGEAGK MPDIRRELGV LMRPTVLMSL ATTVMGAGAM FTLYTYVAPV LTDLTGASEG FVTLALILIG VGFTIGNALG GRLADWSLNG ATRMFLAALA IISLVLPFLL GSHIGAAIGL LAWGAAAFAI VPPVQTRVMQ AASEAPGLAS SINIGAFNLG NAVGAALGGG VISAGYGYAA IPVAGGLLAA AGLLFTLSRR PKTALAPSAC
|
| |