Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_2042 |
Symbol | gltA |
ID | 5380063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 2133566 |
End bp | 2134858 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640834710 |
Product | type II citrate synthase |
Protein accession | YP_001370587 |
Protein GI | 153009372 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0529149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGATA GGACAGCCAG CTTTACACTA GAAGGCAAAA CATTCGACCT GCCTGTACGA CAAGGCACTG TCGGACCAGA CGTCGTCGAT ATCGGTCCAC TTTACAAAAA CTCGCAGATG TTCACGTACG ATCCCGGTTT CACGTCCACG GCATCGTGCG AATCCAAGAT CACTTACATC GATGGCGATG AAGGCACCTT GCTCTATCGT GGTTACCCGA TCGATCAGCT TGCCGAACAC GGTGATTTTC TGGAAACCTG CTATCTGCTT CTCTACGGCG AATTGCCTAC CGCGACGCAG AAGTCTGACT TCGACTACCG TGTGACACGC CACACGATGA TTCACGAACA GATGACGAAG TTCTTTACGG GCTTCCGTCG TGACGCTCAT CCCATGGCAG TCATGGTTGG CTGCGTTGGT GCAATGTCGG CTTTCTATCA TGACTCGACC GACATCACCG ACCCGCATCA GCGTATGGTC GCGTCGATCC GTCTGATCGC CAAGGTTCCA ACGCTTGCCG CCATGGCCTA CAAGTACCAT ATCGGGCAGC CGTTCATGTA CCCGAAGAAC GACCTCGATT TTGCGTCGAA CTTCCTGCAC ATGTGCTTTG GCGTTCCATG CGAGGATTAC AAGGTCAATC CGGTTCTGGC TCGTGCAATG GACCGCATCT TCATTCTCCA CGCAGATCAT GAGCAGAATG CCTCGACCTC GACCGTGCGC CTTGCCGGTT CTTCTGGAGC CAATCCGTTT GCATGTATCG CTGCCGGCGT TGCCTGCCTC TGGGGCCCTG CCCACGGCGG CGCAAATGAA GCTGCGCTCA ACATGCTGGC TGAAATCGGT TCTGTGGACC GCATTCCAGA ATTCATCGCC CGTGCAAAGG ACAAGAACGA TCCGTTCCGT CTGATGGGCT TCGGTCACCG CGTCTACAAG AACTACGATC CACGCGCCAA GATCATGCAG AAGACCTGCC ATGAAGTTCT GGGCGAATTG GGTATCAAGG ACGATCCGTT GCTCGACGTT GCAATGGAAC TGGAAAAGAT CGCCCTGACG GACGAATACT TCATTGAGAA GAAGCTTTAT CCAAACATCG ACTTCTACTC CGGCATCACG CTGAAGGCTC TCGGCTTCCC GACCGAAATG TTCACGGTTC TCTTTGCTCT CGCCCGCACC GTCGGCTGGG TCGCACAGTG GAAGGAAATG ATCGAAGATC CGCAGCAGAA GATCGGCCGT CCGCGCCAGC TCTATACCGG CGCTCCCGAG CGGGATTACG TGCCGCTCGC AAAGCGTAAG TAA
|
Protein sequence | MSDRTASFTL EGKTFDLPVR QGTVGPDVVD IGPLYKNSQM FTYDPGFTST ASCESKITYI DGDEGTLLYR GYPIDQLAEH GDFLETCYLL LYGELPTATQ KSDFDYRVTR HTMIHEQMTK FFTGFRRDAH PMAVMVGCVG AMSAFYHDST DITDPHQRMV ASIRLIAKVP TLAAMAYKYH IGQPFMYPKN DLDFASNFLH MCFGVPCEDY KVNPVLARAM DRIFILHADH EQNASTSTVR LAGSSGANPF ACIAAGVACL WGPAHGGANE AALNMLAEIG SVDRIPEFIA RAKDKNDPFR LMGFGHRVYK NYDPRAKIMQ KTCHEVLGEL GIKDDPLLDV AMELEKIALT DEYFIEKKLY PNIDFYSGIT LKALGFPTEM FTVLFALART VGWVAQWKEM IEDPQQKIGR PRQLYTGAPE RDYVPLAKRK
|
| |