Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1956 |
Symbol | rplC |
ID | 5381007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 2060474 |
End bp | 2061190 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640834624 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001370501 |
Protein GI | 153009286 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00677731 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCAG GTGTTATTGC ACAGAAGCTG GGCATGACCC GCGTCTATAA CGACGCCGGC GAGCATGTGC CGGTGACGGT TCTCCGCATG GAGAATTGCC ACGTGGTAGC TCAGCGTACA GTTGAAAAGA ATGGTTACAC GGCTGTTCAG CTTGGCGTTG GACTTGCCAA GGTAAAGAAC ACGTCCAAGG CTATGCGCGG TCATTTCGCG AAGGCCGAGG TCGAGCCGAA GGCGAAGGTC GCGGAATTCC GCGTTTCGCC GGACAACCTC CTCGAAGTCG GCGCTGAAAT CACCGCCGAA CACTTCGTCG CCGGCCAGAA GGTCGATGTG ACGGGTACTT CGATTGGTAA GGGCTTTGCT GGTGTTATGA AGCGTCATAA CTTCGCCGGT CATCGCGCTT CCCATGGTAA CTCCATTACC CACCGCGCTC ACGGCTCGAC CGGTCAGCGT CAGGACCCGG GTAAGGTGTT CAAGGGCAAG AAGATGGCTG GTCACATGGG CCAGACCCGC GTAACCACGC AGAATATTGA AGTTGTCTCG ACGGACAGCG ATCGCGGCCT CATTCTGGTT CGCGGTGCGG TTCCTGGCTC CAAGGGCGCC TGGATCATCG TGCGCGATGC GGTAAAGGTC TCGCTGCCTG AGAACGCGCC GAAGCCGGCC GCTCTGCGTG CAGGTGCCGC GAAGGCTGAA GCTGTCGCGA CTGAGGGAGC CGAATAA
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Protein sequence | MRSGVIAQKL GMTRVYNDAG EHVPVTVLRM ENCHVVAQRT VEKNGYTAVQ LGVGLAKVKN TSKAMRGHFA KAEVEPKAKV AEFRVSPDNL LEVGAEITAE HFVAGQKVDV TGTSIGKGFA GVMKRHNFAG HRASHGNSIT HRAHGSTGQR QDPGKVFKGK KMAGHMGQTR VTTQNIEVVS TDSDRGLILV RGAVPGSKGA WIIVRDAVKV SLPENAPKPA ALRAGAAKAE AVATEGAE
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